RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MRC2Q9UBG0 1479 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 ANKRD34BA5PLL1 514 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 GNAT3A8MTJ3 354 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 PRR33A8MZF0 331 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 SRFP11831 508 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 FOSL1P15407 271 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 TNK2Q07912 1038 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 NKPD1Q17RQ9 610 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 PRSS36Q5K4E3 855 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 DCAF15Q66K64 600 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 EEPD1Q7L9B9 569 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 NOP9Q86U38 636 aaKnown RBP5.1□□□□□ -1.59
SRP54-209ENST00000555746 PIF1Q9H611 641 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 SUSD2Q9UGT4 822 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 LEMD3Q9Y2U8 911 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 U3KQE9 123 aa5.1□□□□□ -1.59
SRP54-209ENST00000555746 A0A087WZG4 1122 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 FAM221BA6H8Z2 402 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 CYP26A1O43174 497 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 SUSD5O60279 629 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 LRRN2O75325 713 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 CBX7O95931 251 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 TP53P04637 393 aaPredicted RBP5.09□□□□□ -1.59
SRP54-209ENST00000555746 CEACAM5P06731 702 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 EPHX1P07099 455 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 FURINP09958 794 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 NAT2P11245 290 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 CD247P20963 164 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 HEATR6Q6AI08 1181 aaKnown RBP5.09□□□□□ -1.59
SRP54-209ENST00000555746 SPACA3Q8IXA5 215 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 ZNF513Q8N8E2 541 aaPredicted RBP5.09□□□□□ -1.59
SRP54-209ENST00000555746 ENOX1Q8TC92 643 aaKnown RBP5.09□□□□□ -1.59
SRP54-209ENST00000555746 SRPK1Q96SB4 655 aaKnown RBP5.09□□□□□ -1.59
SRP54-209ENST00000555746 GPR62Q9BZJ7 368 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 GP6Q9HCN6 339 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 PLAGL2Q9UPG8 496 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 PCDHB12Q9Y5F1 795 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 SNX11Q9Y5W9 270 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 ST14Q9Y5Y6 855 aa5.09□□□□□ -1.59
SRP54-209ENST00000555746 RBAK-RBAKDNI3L0D1 243 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 ITGB7P26010 798 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 CLCN7P51798 805 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 SNW1Q13573 536 aaKnown RBP5.08□□□□□ -1.6
SRP54-209ENST00000555746 BMS1Q14692 1282 aaKnown RBP5.08□□□□□ -1.6
SRP54-209ENST00000555746 TCEAL1Q15170 157 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 IFI16Q16666 785 aaKnown RBP5.08□□□□□ -1.6
SRP54-209ENST00000555746 NETO1Q8TDF5 533 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 MRFAP1L1Q96HT8 127 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 PRDM14Q9GZV8 571 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 GBP3Q9H0R5 595 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 SEMA6BQ9H3T3 888 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 WHRNQ9P202 907 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 ZC3H7BQ9UGR2 993 aaKnown RBP5.08□□□□□ -1.6
SRP54-209ENST00000555746 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
SRP54-209ENST00000555746 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 TGFB1P01137 390 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 ITGA4P13612 1032 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 ZNF445P59923 1031 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 SLC10A6Q3KNW5 377 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 ARHGAP27Q6ZUM4 889 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 THAP5Q7Z6K1 395 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 JMYQ8N9B5 988 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 FAM181AQ8N9Y4 354 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 SYTL5Q8TDW5 730 aaPredicted RBP5.07□□□□□ -1.6
SRP54-209ENST00000555746 SGSM3Q96HU1 749 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 RCC1LQ96I51 464 aaKnown RBP5.07□□□□□ -1.6
SRP54-209ENST00000555746 APBA2Q99767 749 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 DUSP15Q9H1R2 295 aaPredicted RBP5.07□□□□□ -1.6
SRP54-209ENST00000555746 SEMA3GQ9NS98 782 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 FAM86C1Q9NVL1 165 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 FBXL21Q9UKT6 434 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 RNF112Q9ULX5 631 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
SRP54-209ENST00000555746 TMEM265A0A087WTH1 108 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 SHISA3A0PJX4 238 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 FAM155AB1AL88 458 aaPredicted RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 PPM1BO75688 479 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 NMIQ13287 307 aaPredicted RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 INTS5Q6P9B9 1019 aaKnown RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 TMC3Q7Z5M5 1100 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 PLD6Q8N2A8 252 aaKnown RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 ARHGEF39Q8N4T4 335 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 DAGLBQ8NCG7 672 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 ASCC2Q9H1I8 757 aaPredicted RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 TRIT1Q9H3H1 467 aaKnown RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 LRRC4CQ9HCJ2 640 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 GFOD1Q9NXC2 390 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 ZMYM5Q9UJ78 669 aa5.06□□□□□ -1.6
SRP54-209ENST00000555746 DIS3Q9Y2L1 958 aaKnown RBP5.06□□□□□ -1.6
SRP54-209ENST00000555746 PITPNM2Q9BZ72 1349 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 KIF13AQ9H1H9 1805 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 IQCA1LA6NCM1 817 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 CAPNS1P04632 268 aa5.05□□□□□ -1.6
SRP54-209ENST00000555746 ITIH2P19823 946 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms