RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 OVOS2A0A0G2JMS6 1433 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 PDE8AO60658 829 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 XBP1P17861 261 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 BRD3Q15059 726 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 ESR2Q92731 530 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 FAM237AA0A1B0GTK4 181 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 CCDC196A0A1B0GTZ2 297 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 KLRK1P26718 216 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 STAT6P42226 847 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 KANSL2Q9H9L4 492 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 MAP2K7O14733 419 aa19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 UQCRFS1P1P0C7P4 283 aa19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 ERCC5P28715 1186 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 SF3A3Q12874 501 aaKnown RBP eCLIP19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 PROCA1Q8NCQ7 364 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 NDUFA10O95299 355 aa19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 TCP11X2Q5H9J9 407 aa19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 ZSCAN10Q96SZ4 725 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-208ENST00000555462 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 NT5DC1Q5TFE4 455 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 CDKAL1Q5VV42 579 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 CYP26C1Q6V0L0 522 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 LUC7L2Q9Y383 392 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 PDE2AO00408 941 aaPredicted RBP19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 CHRNDQ07001 517 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 TSR1Q2NL82 804 aaKnown RBP19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 GOLGA6L1Q8N7Z2 621 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 IQUBQ8NA54 791 aa19.19■□□□□ 0.66
PPP4R3A-208ENST00000555462 EIF3JO75822 258 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 GGCXP38435 758 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 INF2Q27J81 1249 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 SRLQ86TD4 932 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 CCDC148Q8NFR7 591 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 EXOC4Q96A65 974 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 FAM207AQ9NSI2 230 aaPredicted RBP19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 RPN1P04843 607 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 KCTD16Q68DU8 428 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 CTR9Q6PD62 1173 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 GOLGA5Q8TBA6 731 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 RRP36Q96EU6 259 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 NIP7Q9Y221 180 aaKnown RBP eCLIP19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 WDR17Q8IZU2 1322 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 UTRNP46939 3433 aa19.18■□□□□ 0.66
PPP4R3A-208ENST00000555462 NCK2O43639 380 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 ARID4AP29374 1257 aaPredicted RBP19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 E2F4Q16254 413 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 ANKRD20A12PQ8NF67 263 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 TMEM60Q9H2L4 133 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 SAMM50Q9Y512 469 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 KIF13AQ9H1H9 1805 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 TMC4Q7Z404 712 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 DNAAF5Q86Y56 855 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 DYNLL2Q96FJ2 89 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 MLXIPQ9HAP2 919 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 BRMS1Q9HCU9 246 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 CWC15Q9P013 229 aaKnown RBP19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 FAM205AQ6ZU69 1335 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 IDEP14735 1019 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 PBX1P40424 430 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 LRRC31Q6UY01 552 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 TMTC1Q8IUR5 882 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 JAKMIP2Q96AA8 810 aa19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 TTF2Q9UNY4 1162 aaKnown RBP19.17■□□□□ 0.66
PPP4R3A-208ENST00000555462 TSPY2A6NKD2 308 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 FCER1AP12319 257 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 ARID5AQ03989 594 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 CCDC96Q2M329 555 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 CTCFLQ8NI51 663 aaPredicted RBP19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 PHF20Q9BVI0 1012 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 IGHMBP2P38935 993 aaKnown RBP19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 HERVK_113P62684 666 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 TYW1BQ6NUM6 668 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 HEATR3Q7Z4Q2 680 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 CCDC155Q8N6L0 562 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
PPP4R3A-208ENST00000555462 ESYT3A0FGR9 886 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 TRIML1Q8N9V2 468 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SLC44A5Q8NCS7 719 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SMARCC1Q92922 1105 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 GSDMAQ96QA5 445 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 FAM107BQ9H098 131 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SEC23AQ15436 765 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SPATA20Q8TB22 786 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 GJA10Q969M2 543 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 SAR1BQ9Y6B6 198 aa19.15■□□□□ 0.66
PPP4R3A-208ENST00000555462 WDR19Q8NEZ3 1342 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms