RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
PRKCH-207ENST00000553831 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
PRKCH-207ENST00000553831 MB21D1Q8N884 522 aa16.85■□□□□ 0.29
PRKCH-207ENST00000553831 NUDT12Q9BQG2 462 aa16.85■□□□□ 0.29
PRKCH-207ENST00000553831 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
PRKCH-207ENST00000553831 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
PRKCH-207ENST00000553831 NMT2O60551 498 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 EN2P19622 333 aaPredicted RBP16.84■□□□□ 0.29
PRKCH-207ENST00000553831 CYP2B6P20813 491 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 MORN1Q5T089 497 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 WDR78Q5VTH9 848 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 SKAP1Q86WV1 359 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 MOV10L1Q9BXT6 1211 aaKnown RBP16.84■□□□□ 0.29
PRKCH-207ENST00000553831 SPATC1LQ9H0A9 340 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 RAD50Q92878 1312 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
PRKCH-207ENST00000553831 CCL5P13501 91 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 CHMLP26374 656 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 STAG1Q8WVM7 1258 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 USP6NLQ92738 828 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
PRKCH-207ENST00000553831 NEDD4P46934 1319 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 HMGCRP04035 888 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 RGS2P41220 211 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 PLS1Q14651 629 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 TMEM132BQ14DG7 1078 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 SLFN13Q68D06 897 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 NKX2-3Q8TAU0 364 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 TRIB2Q92519 343 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 UNC93B1Q9H1C4 597 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 ADAMTS5Q9UNA0 930 aa16.82■□□□□ 0.28
PRKCH-207ENST00000553831 VWA5AO00534 786 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 ZNF213O14771 459 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
PRKCH-207ENST00000553831 ERCC3P19447 782 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 PTPREP23469 700 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 NOVP48745 357 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 TRIM32Q13049 653 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 MAP2K5Q13163 448 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 GRB14Q14449 540 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 APBA2Q99767 749 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 RNF208Q9H0X6 261 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
PRKCH-207ENST00000553831 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
PRKCH-207ENST00000553831 TNRC18O15417 2968 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-207ENST00000553831 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-207ENST00000553831 SLC15A5A6NIM6 579 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 BMP3P12645 472 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
PRKCH-207ENST00000553831 CCL14Q16627 93 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 RUFY2Q8WXA3 655 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
PRKCH-207ENST00000553831 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-207ENST00000553831 GJB1P08034 283 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
PRKCH-207ENST00000553831 IMMTQ16891 758 aaKnown RBP16.79■□□□□ 0.28
PRKCH-207ENST00000553831 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 GMCL1Q96IK5 515 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 FEM1BQ9UK73 627 aa16.79■□□□□ 0.28
PRKCH-207ENST00000553831 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
PRKCH-207ENST00000553831 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 SGSM2O43147 1006 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 SLC25A27O95847 323 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 MCCP23508 829 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 ADORA2AP29274 412 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 STAT3P40763 770 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 SLC1A4P43007 532 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 RIOX2Q8IUF8 465 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 TRMT44Q8IYL2 757 aaKnown RBP16.78■□□□□ 0.28
PRKCH-207ENST00000553831 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
PRKCH-207ENST00000553831 ESR2Q92731 530 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRKCH-207ENST00000553831 MROH8Q9H579 483 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
PRKCH-207ENST00000553831 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
PRKCH-207ENST00000553831 NEFLP07196 543 aa16.77■□□□□ 0.28
PRKCH-207ENST00000553831 HOXC6P09630 235 aa16.77■□□□□ 0.28
PRKCH-207ENST00000553831 TOP1P11387 765 aaKnown RBP16.77■□□□□ 0.28
PRKCH-207ENST00000553831 GJA8P48165 433 aa16.77■□□□□ 0.28
PRKCH-207ENST00000553831 PTH1RQ03431 593 aa16.77■□□□□ 0.28
PRKCH-207ENST00000553831 MAP3K21Q5TCX8 1036 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms