RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ALBP02768 609 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 GSTP1P09211 210 aaKnown RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 FGRP09769 529 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 BCRP11274 1271 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 RBL2Q08999 1139 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 ITPK1Q13572 414 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 POU4F3Q15319 338 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 CWF19L2Q2TBE0 894 aaKnown RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 HP1BP3Q5SSJ5 553 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 MAP1SQ66K74 1059 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 TXNDC11Q6PKC3 985 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 BNC2Q6ZN30 1099 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 C1orf229Q6ZS94 237 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 MCF2L2Q86YR7 1114 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 KLHL23Q8NBE8 558 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 GRIN3AQ8TCU5 1115 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 BTBD6Q96KE9 485 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 GINM1Q9NU53 330 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 STK32BQ9NY57 414 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 UBP1Q9NZI7 540 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 R3HCC1Q9Y3T6 440 aaKnown RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 CD2APQ9Y5K6 639 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 ERBB4Q15303 1308 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 EVC2Q86UK5 1308 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 KDRP35968 1356 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 TONSLQ96HA7 1378 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 EDC4Q6P2E9 1401 aaKnown RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 TLR3O15455 904 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 HSPA6P17066 643 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SOX9P48436 509 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 ZNF165P49910 485 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 RPL6Q02878 288 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 ZNF252P-AS1Q0IIN9 211 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SEPT6Q14141 434 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 PDE3AQ14432 1141 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SUZ12Q15022 739 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SEZ6Q53EL9 994 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 TRAPPC3LQ5T215 181 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 C8orf86Q6ZUL3 223 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 DPH6Q7L8W6 267 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 MAP4K3Q8IVH8 894 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SLITRK4Q8IW52 837 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 CKAP2LQ8IYA6 745 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 STK35Q8TDR2 534 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 PIGBQ92521 554 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 CRBNQ96SW2 442 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 SRRTQ9BXP5 876 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 ZC3H12CQ9C0D7 883 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 LNPKQ9C0E8 428 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 PRDM6Q9NQX0 595 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 ENAMQ9NRM1 1142 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 PCDHA4Q9UN74 947 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 ATP10DQ9P241 1426 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 QSER1Q2KHR3 1735 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 KIAA1551Q9HCM1 1747 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 MAP2P11137 1827 aaKnown RBP3.32□□□□□ -1.88
CPSF6-207ENST00000551516 WNK3Q9BYP7 1800 aa3.32□□□□□ -1.88
CPSF6-207ENST00000551516 PXDNLA1KZ92 1463 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 KDM6AO15550 1401 aaPredicted RBP3.31□□□□□ -1.88
CPSF6-207ENST00000551516 INSRP06213 1382 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 KTN1Q86UP2 1357 aaKnown RBP3.31□□□□□ -1.88
CPSF6-207ENST00000551516 FAM221AA4D161 298 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 CILPO75339 1184 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 CELA2BP08218 269 aaPredicted RBP3.31□□□□□ -1.88
CPSF6-207ENST00000551516 IMPDH2P12268 514 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 MAOBP27338 520 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 KRT76Q01546 638 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 HSP90AB2PQ58FF8 381 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 RASIP1Q5U651 963 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 FBXW10Q5XX13 1052 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 HGSNATQ68CP4 663 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 LYPD4Q6UWN0 246 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 GK5Q6ZS86 529 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 REC114Q7Z4M0 266 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 PDZD3Q86UT5 571 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 DMRTC2Q8IXT2 367 aaPredicted RBP3.31□□□□□ -1.88
CPSF6-207ENST00000551516 LINC00116Q8NCU8 138 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 NEDD1Q8NHV4 660 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 KLHDC7BQ96G42 594 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 FERD3LQ96RJ6 166 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 LRRC3Q9BY71 257 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 ZNF408Q9H9D4 720 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 RRAGCQ9HB90 399 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 KRT82Q9NSB4 513 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 MRVI1Q9Y6F6 885 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
CPSF6-207ENST00000551516 AKAP12Q02952 1782 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 LY75O60449 1722 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ITSN1Q15811 1721 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 MON2Q7Z3U7 1717 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 SHISA8B8ZZ34 492 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 U2SURPO15042 1029 aaKnown RBP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 SLFN14P0C7P3 912 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 SLURP2P0DP57 97 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 TM4SF1P30408 202 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ETFBP38117 255 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 CRKP46108 304 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 EIF6P56537 245 aaKnown RBP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 NLRP12P59046 1061 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 MPRIPQ6WCQ1 1025 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms