RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PDE1AP54750 535 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 MB21D1Q8N884 522 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 SHCBP1Q8NEM2 672 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 APPBP2Q92624 585 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.16
NUP188-211ENST00000550219 GOPCQ9HD26 462 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 PARP14Q460N5 1801 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 GPAA1O43292 621 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
NUP188-211ENST00000550219 COL6A1P12109 1028 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 TDO2P48775 406 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 LRRC26Q2I0M4 334 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 ANO1Q5XXA6 986 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 KANSL2Q9H9L4 492 aa16.01■□□□□ 0.15
NUP188-211ENST00000550219 A0A1W2PPC1 479 aa16■□□□□ 0.15
NUP188-211ENST00000550219 M0R2C6 588 aa16■□□□□ 0.15
NUP188-211ENST00000550219 SOX1O00570 391 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 RNF113AO15541 343 aaKnown RBP16■□□□□ 0.15
NUP188-211ENST00000550219 MSCO60682 206 aa16■□□□□ 0.15
NUP188-211ENST00000550219 APPP05067 770 aa16■□□□□ 0.15
NUP188-211ENST00000550219 CYBAP13498 195 aa16■□□□□ 0.15
NUP188-211ENST00000550219 MAGEA10P43363 369 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
NUP188-211ENST00000550219 SKAP1Q86WV1 359 aa16■□□□□ 0.15
NUP188-211ENST00000550219 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
NUP188-211ENST00000550219 LRCH3Q96II8 777 aa16■□□□□ 0.15
NUP188-211ENST00000550219 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 GDF15Q99988 308 aa16■□□□□ 0.15
NUP188-211ENST00000550219 SENP6Q9GZR1 1112 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 MROH8Q9H579 483 aa16■□□□□ 0.15
NUP188-211ENST00000550219 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
NUP188-211ENST00000550219 EPB41L4AQ9HCS5 686 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 COL11A1P12107 1806 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
NUP188-211ENST00000550219 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
NUP188-211ENST00000550219 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 STRNO43815 780 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 COBLO75128 1261 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 RASA1P20936 1047 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
NUP188-211ENST00000550219 OLFML2BQ68BL8 750 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
NUP188-211ENST00000550219 PRDM1O75626 825 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 ZFYP08048 801 aaPredicted RBP15.98■□□□□ 0.15
NUP188-211ENST00000550219 FCER1AP12319 257 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 SBK1Q52WX2 424 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 MMP19Q99542 508 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 FSD1Q9BTV5 496 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
NUP188-211ENST00000550219 PPP1R9AQ9ULJ8 1098 aa15.98■□□□□ 0.15
NUP188-211ENST00000550219 DNM1LO00429 736 aa15.97■□□□□ 0.15
NUP188-211ENST00000550219 ERC2O15083 957 aa15.97■□□□□ 0.15
NUP188-211ENST00000550219 MDM2Q00987 491 aaPredicted RBP15.97■□□□□ 0.15
NUP188-211ENST00000550219 PRAMEF19Q5SWL8 479 aa15.97■□□□□ 0.15
NUP188-211ENST00000550219 GJC2Q5T442 439 aaPredicted RBP15.97■□□□□ 0.15
NUP188-211ENST00000550219 MAML3Q96JK9 1138 aa15.97■□□□□ 0.15
NUP188-211ENST00000550219 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
NUP188-211ENST00000550219 UBE2OQ9C0C9 1292 aaKnown RBP15.97■□□□□ 0.15
NUP188-211ENST00000550219 KBTBD13C9JR72 458 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 VWA5AO00534 786 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 SLC25A27O95847 323 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 PGK2P07205 417 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 GNAT2P19087 354 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 BMP8BP34820 402 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 KCTD2Q14681 263 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 LRRFIP1Q32MZ4 808 aaKnown RBP15.96■□□□□ 0.15
NUP188-211ENST00000550219 GIMAP6Q6P9H5 292 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 RIOX2Q8IUF8 465 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 ABRAQ8N0Z2 381 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
NUP188-211ENST00000550219 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
NUP188-211ENST00000550219 SEPT4O43236 478 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 NDUFB10O96000 172 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 STAT3P40763 770 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 TDHQ8IZJ6 230 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
NUP188-211ENST00000550219 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 ZNF214Q9UL59 606 aaPredicted RBP15.95■□□□□ 0.14
NUP188-211ENST00000550219 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
NUP188-211ENST00000550219 CTDP1Q9Y5B0 961 aaPredicted RBP15.95■□□□□ 0.14
NUP188-211ENST00000550219 F5H6K3 240 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 IGHA2P01877 340 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 RTP1P59025 263 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 KLRC3Q07444 240 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 FAM47AQ5JRC9 791 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 TTC22Q5TAA0 569 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 IFNL3Q8IZI9 196 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
NUP188-211ENST00000550219 ARRDC4Q8NCT1 418 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 NAPBQ9H115 298 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 ZNF287Q9HBT7 754 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 NYAP2Q9P242 653 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 ADAMTS5Q9UNA0 930 aa15.94■□□□□ 0.14
NUP188-211ENST00000550219 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms