RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 WDR78Q5VTH9 848 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 SAMD1Q6SPF0 538 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 GMCL1P1Q8NEA9 526 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 MKL1Q969V6 931 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 HMGCRP04035 888 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 FGRP09769 529 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 CCL5P13501 91 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 MTFR1Q15390 333 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 NUP88Q99567 741 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 SPATC1LQ9H0A9 340 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 INCENPQ9NQS7 918 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 FBXO28Q9NVF7 368 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 ZNFX1Q9P2E3 1918 aaKnown RBP20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 PPP1R9AQ9ULJ8 1098 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 IVNS1ABPQ9Y6Y0 642 aa20.4■□□□□ 0.86
CHMP1A-208ENST00000550102 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.86
CHMP1A-208ENST00000550102 RRP12Q5JTH9 1297 aaKnown RBP20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 TBC1D10CQ8IV04 446 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 RUFY2Q8WXA3 655 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 APBA2Q99767 749 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 MOV10L1Q9BXT6 1211 aaKnown RBP20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 NBPF3Q9H094 633 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 STX8Q9UNK0 236 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 TACC3Q9Y6A5 838 aa20.39■□□□□ 0.85
CHMP1A-208ENST00000550102 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 RGS2P41220 211 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 PLS1Q14651 629 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 MORN1Q5T089 497 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 AKNAD1Q5T1N1 836 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 MFSD6Q6ZSS7 791 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 SHCBP1Q8NEM2 672 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 SLF1Q9BQI6 1058 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 FRMPD3Q5JV73 1810 aa20.38■□□□□ 0.85
CHMP1A-208ENST00000550102 SLC15A5A6NIM6 579 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 ZNF213O14771 459 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 NMT2O60551 498 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 ZKSCAN1P17029 563 aaPredicted RBP20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 CYP2B6P20813 491 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 TRMT44Q8IYL2 757 aaKnown RBP20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 USP6NLQ92738 828 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 RNF208Q9H0X6 261 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 CTNNA3Q9UI47 895 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 ADAMTS5Q9UNA0 930 aa20.37■□□□□ 0.85
CHMP1A-208ENST00000550102 VWA5AO00534 786 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 NEFLP07196 543 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 EN2P19622 333 aaPredicted RBP20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 PTPREP23469 700 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 CHMLP26374 656 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 MAP2K5Q13163 448 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 GRB14Q14449 540 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 IMMTQ16891 758 aaKnown RBP20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 SLFN13Q68D06 897 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 TRIB2Q92519 343 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 UNC93B1Q9H1C4 597 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 IL25Q9H293 177 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 MROH8Q9H579 483 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 IL17RBQ9NRM6 502 aa20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
CHMP1A-208ENST00000550102 NEDD4P46934 1319 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 GJB1P08034 283 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 ERCC3P19447 782 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 NT5C2P49902 561 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 FEM1BQ9UK73 627 aa20.35■□□□□ 0.85
CHMP1A-208ENST00000550102 SLC25A27O95847 323 aa20.34■□□□□ 0.85
CHMP1A-208ENST00000550102 BMP3P12645 472 aa20.34■□□□□ 0.85
CHMP1A-208ENST00000550102 COPB2P35606 906 aa20.34■□□□□ 0.85
CHMP1A-208ENST00000550102 NCAPG2Q86XI2 1143 aa20.34■□□□□ 0.85
CHMP1A-208ENST00000550102 ESR2Q92731 530 aa20.34■□□□□ 0.85
CHMP1A-208ENST00000550102 STRNO43815 780 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 SLC1A4P43007 532 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 GJA8P48165 433 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 NOVP48745 357 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 REPS2Q8NFH8 660 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 SHISA4Q96DD7 197 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 TCP11L1Q9NUJ3 509 aa20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 ZNF214Q9UL59 606 aaPredicted RBP20.33■□□□□ 0.85
CHMP1A-208ENST00000550102 MKI67P46013 3256 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 HOXC6P09630 235 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 TOP1P11387 765 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 ADORA2AP29274 412 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 STAT2P52630 851 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 RIOX2Q8IUF8 465 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 ABRAQ8N0Z2 381 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 KIFC2Q96AC6 838 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 TEX13BQ9BXU2 312 aa20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.32■□□□□ 0.842e-7■■■■□ 21.5
CHMP1A-208ENST00000550102 PAK6Q9NQU5 681 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 CTDP1Q9Y5B0 961 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-208ENST00000550102 SGSM2O43147 1006 aa20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-208ENST00000550102 STAT3P40763 770 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms