RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 EPB41L2O43491 1005 aaKnown RBP22.52■■□□□ 1.2
DDX55-211ENST00000544429 FLOT1O75955 427 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 ERVK-9P63128 1117 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 ERVK-24P63145 666 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 SEC23AQ15436 765 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 Q3C1V9 767 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 TSGA10IPQ3SY00 556 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 SLFN13Q68D06 897 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 MB21D2Q8IYB1 491 aaPredicted RBP22.52■■□□□ 1.2
DDX55-211ENST00000544429 ENAHQ8N8S7 591 aaPredicted RBP22.52■■□□□ 1.2
DDX55-211ENST00000544429 GPRC5AQ8NFJ5 357 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 KCNB2Q92953 911 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 ZKSCAN3Q9BRR0 538 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 MCOLN1Q9GZU1 580 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 BTBD7Q9P203 1132 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 PPP1R9AQ9ULJ8 1098 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 TRIM17Q9Y577 477 aa22.52■■□□□ 1.2
DDX55-211ENST00000544429 PSMC4P43686 418 aa22.51■■□□□ 1.19
DDX55-211ENST00000544429 TRDNQ13061 729 aa22.51■■□□□ 1.19
DDX55-211ENST00000544429 KIF22Q14807 665 aa22.51■■□□□ 1.19
DDX55-211ENST00000544429 MB21D1Q8N884 522 aa22.51■■□□□ 1.19
DDX55-211ENST00000544429 NCOA7Q8NI08 942 aa22.51■■□□□ 1.19
DDX55-211ENST00000544429 PLA2G6O60733 806 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 SNHG28P0DPA3 235 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 BMP3P12645 472 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 FCGRTP55899 365 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 COL9A3Q14050 684 aaPredicted RBP22.5■■□□□ 1.19
DDX55-211ENST00000544429 ARHGEF6Q15052 776 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 RASGRP2Q7LDG7 609 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 REPS2Q8NFH8 660 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 ATG4CQ96DT6 458 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 TNKSO95271 1327 aa22.5■■□□□ 1.19
DDX55-211ENST00000544429 REC8O95072 547 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 ANTXR2P58335 489 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 FBXO46Q6PJ61 603 aaPredicted RBP22.49■■□□□ 1.19
DDX55-211ENST00000544429 DCAF4Q8WV16 495 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 FEM1BQ9UK73 627 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 PTPN22Q9Y2R2 807 aa22.49■■□□□ 1.19
DDX55-211ENST00000544429 VWA5AO00534 786 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 RAD21O60216 631 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 PDHBP11177 359 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 MCCP23508 829 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 SLC1A4P43007 532 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 PRMT2P55345 433 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 RNF20Q5VTR2 975 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 RALYLQ86SE5 291 aaKnown RBP22.48■■□□□ 1.19
DDX55-211ENST00000544429 RASEFQ8IZ41 740 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 TNS4Q8IZW8 715 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 PRPF38AQ8NAV1 312 aaKnown RBP22.48■■□□□ 1.19
DDX55-211ENST00000544429 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 PORCNQ9H237 461 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 SRRDQ9UH36 339 aa22.48■■□□□ 1.19
DDX55-211ENST00000544429 HSPA4P34932 840 aa22.47■■□□□ 1.19
DDX55-211ENST00000544429 UBAC1Q9BSL1 405 aa22.47■■□□□ 1.19
DDX55-211ENST00000544429 MTA3Q9BTC8 594 aa22.47■■□□□ 1.19
DDX55-211ENST00000544429 ZNF214Q9UL59 606 aaPredicted RBP22.47■■□□□ 1.19
DDX55-211ENST00000544429 TMEM132BQ14DG7 1078 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 BTNL9Q6UXG8 535 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 PNMA1Q8ND90 353 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 IGDCC4Q8TDY8 1250 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 SPATC1LQ9H0A9 340 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
DDX55-211ENST00000544429 ZNF236Q9UL36 1845 aa22.45■■□□□ 1.19
DDX55-211ENST00000544429 TNPO2O14787 897 aaKnown RBP22.45■■□□□ 1.18
DDX55-211ENST00000544429 ATP2A1O14983 1001 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 FMNL1O95466 1100 aaPredicted RBP22.45■■□□□ 1.18
DDX55-211ENST00000544429 MAPK4P31152 587 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 STAT2P52630 851 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 KCTD1Q719H9 257 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 FAM160B2Q86V87 743 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 MOV10L1Q9BXT6 1211 aaKnown RBP22.45■■□□□ 1.18
DDX55-211ENST00000544429 SLC38A10Q9HBR0 1119 aa22.45■■□□□ 1.18
DDX55-211ENST00000544429 TMEM232C9JQI7 657 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 HOXD10P28358 340 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 CCNA1P78396 465 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 ZNF543Q08ER8 600 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 SHCBP1Q8NEM2 672 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 USP26Q9BXU7 913 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 GABRQQ9UN88 632 aa22.44■■□□□ 1.18
DDX55-211ENST00000544429 FDX1P10109 184 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 MCM5P33992 734 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 PRKCZQ05513 592 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 IFIT1BQ5T764 474 aaKnown RBP22.43■■□□□ 1.18
DDX55-211ENST00000544429 CHST3Q7LGC8 479 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 USP6NLQ92738 828 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 KAT14Q9H8E8 782 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 SENP2Q9HC62 589 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 HPS5Q9UPZ3 1129 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 PTCH2Q9Y6C5 1203 aa22.43■■□□□ 1.18
DDX55-211ENST00000544429 WDR19Q8NEZ3 1342 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 ZNFX1Q9P2E3 1918 aaKnown RBP22.42■■□□□ 1.18
DDX55-211ENST00000544429 IFIT3O14879 490 aaKnown RBP22.42■■□□□ 1.18
DDX55-211ENST00000544429 ECM2O94769 699 aaPredicted RBP22.42■■□□□ 1.18
DDX55-211ENST00000544429 IRF5Q13568 498 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 KRT32Q14532 448 aa22.42■■□□□ 1.18
DDX55-211ENST00000544429 GPR142Q7Z601 462 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms