RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 EYSQ5T1H1 3165 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 TRIM43BA6NCK2 446 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 RAB11FIP3O75154 756 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 ATP5JP18859 108 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 FAM47AQ5JRC9 791 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 C9orf50Q5SZB4 431 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 C16orf86Q6ZW13 317 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 BADQ92934 168 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 TRIM43Q96BQ3 446 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-207ENST00000541661 FAM161BQ96MY7 647 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 PRDM5Q9NQX1 630 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-207ENST00000541661 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 MYH7P12883 1935 aa15.78■□□□□ 0.12
SCARB1-207ENST00000541661 USP17L12C9JPN9 530 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 USP17L21D6R901 530 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 SMIM22K7EJ46 135 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 HMMRO75330 724 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 MBD4O95243 580 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 MS4A1P11836 297 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 SMAD3P84022 425 aaKnown RBP15.77■□□□□ 0.12
SCARB1-207ENST00000541661 ZNF792Q3KQV3 632 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 SIRT2Q8IXJ6 389 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 FERMT2Q96AC1 680 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.125e-8■■■■■ 28.3
SCARB1-207ENST00000541661 SEMA6BQ9H3T3 888 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 KANSL2Q9H9L4 492 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 XPNPEP3Q9NQH7 507 aa15.77■□□□□ 0.12
SCARB1-207ENST00000541661 ROBO3Q96MS0 1386 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 CYP2D7A0A087X1C5 515 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 APBB1O00213 710 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-207ENST00000541661 RARBP10826 455 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
SCARB1-207ENST00000541661 TLE2Q04725 743 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 UBE3CQ15386 1083 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 MMP19Q99542 508 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-207ENST00000541661 HAUS7Q99871 368 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 FBXO28Q9NVF7 368 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 TACC3Q9Y6A5 838 aa15.76■□□□□ 0.11
SCARB1-207ENST00000541661 CDH23Q9H251 3354 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 GREB1LQ9C091 1923 aaPredicted RBP15.75■□□□□ 0.11
SCARB1-207ENST00000541661 VWA5AO00534 786 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 PGK2P07205 417 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 COPB2P35606 906 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 STAT3P40763 770 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 KCTD2Q14681 263 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 RNF180Q86T96 592 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 REPS2Q8NFH8 660 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 ZNF214Q9UL59 606 aaPredicted RBP15.75■□□□□ 0.11
SCARB1-207ENST00000541661 PPP1R9AQ9ULJ8 1098 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 VCANP13611 3396 aa15.75■□□□□ 0.11
SCARB1-207ENST00000541661 KIAA0355O15063 1070 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 ZNF865P0CJ78 1059 aaPredicted RBP15.74■□□□□ 0.11
SCARB1-207ENST00000541661 ITGB8P26012 769 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
SCARB1-207ENST00000541661 MSL3Q8N5Y2 521 aaKnown RBP15.74■□□□□ 0.11
SCARB1-207ENST00000541661 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 TTYH1Q9H313 450 aaPredicted RBP15.74■□□□□ 0.11
SCARB1-207ENST00000541661 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
SCARB1-207ENST00000541661 SPTBN5Q9NRC6 3674 aaKnown RBP15.73■□□□□ 0.11
SCARB1-207ENST00000541661 PGK1P00558 417 aa15.73■□□□□ 0.11
SCARB1-207ENST00000541661 CHGBP05060 677 aa15.73■□□□□ 0.11
SCARB1-207ENST00000541661 CLTBP09497 229 aa15.73■□□□□ 0.11
SCARB1-207ENST00000541661 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-207ENST00000541661 TSEN34Q9BSV6 310 aaKnown RBP15.73■□□□□ 0.11
SCARB1-207ENST00000541661 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCARB1-207ENST00000541661 SLC4A4Q9Y6R1 1079 aa15.73■□□□□ 0.11
SCARB1-207ENST00000541661 TMEM265A0A087WTH1 108 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 A0A1W2PQ45 241 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-207ENST00000541661 A0A1W2PQY0 241 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 AKR1A1P14550 325 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 FAM83BQ5T0W9 1011 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 ANKRD33Q7Z3H0 272 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 TOX2Q96NM4 488 aa15.72■□□□□ 0.11
SCARB1-207ENST00000541661 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
SCARB1-207ENST00000541661 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 EPHB4P54760 987 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 SBK1Q52WX2 424 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 MAMDC4Q6UXC1 1216 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 KLHDC9Q8NEP7 349 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 MAFAQ8NHW3 353 aaPredicted RBP15.71■□□□□ 0.11
SCARB1-207ENST00000541661 NYAP2Q9P242 653 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 ARPP21Q9UBL0 812 aaPredicted RBP15.71■□□□□ 0.11
SCARB1-207ENST00000541661 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.11
SCARB1-207ENST00000541661 SYNGAP1Q96PV0 1343 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 DNAJC25-GNG10A0A024R161 153 aa15.7■□□□□ 0.1
SCARB1-207ENST00000541661 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms