RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 ZSCAN30Q86W11 494 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 EGFL6Q8IUX8 553 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 DNAJB8Q8NHS0 232 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 COX4I2Q96KJ9 171 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 HRASLS5Q96KN8 279 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 ZNRF3Q9ULT6 936 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 SLC5A6Q9Y289 635 aa5.86□□□□□ -1.47
MDM2-226ENST00000540352 VIRMAQ69YN4 1812 aaKnown RBP5.86□□□□□ -1.47
MDM2-226ENST00000540352 IGSF3O75054 1194 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 WNT11O96014 354 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 KIR3DL1P43629 444 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 AOC3Q16853 763 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 CTR9Q6PD62 1173 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 FAM214BQ7L5A3 538 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 VPS37DQ86XT2 251 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 TP53INP2Q8IXH6 220 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 STK11IPQ8N1F8 1099 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 ATG4CQ96DT6 458 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 CCDC39Q9UFE4 941 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 SCAPERQ9BY12 1400 aa5.85□□□□□ -1.47
MDM2-226ENST00000540352 CNTNAP4Q9C0A0 1308 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 UQCRHLA0A096LP55 91 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 TTC36A6NLP5 189 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 H3BS24 57 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 RGS13O14921 159 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 UQCRHP07919 91 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 ZNF865P0CJ78 1059 aaPredicted RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 CLCN7P51798 805 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 EIF6P56537 245 aaKnown RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 GABPB1Q06547 395 aaPredicted RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 CCDC173Q0VFZ6 552 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 BECN1Q14457 450 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 CDCP2Q5VXM1 449 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 FAM43BQ6ZT52 329 aaPredicted RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 SPACA3Q8IXA5 215 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 PPP1R13LQ8WUF5 828 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 KREMEN1Q96MU8 473 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 SRRTQ9BXP5 876 aaKnown RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 CNNM2Q9H8M5 875 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 RAI14Q9P0K7 980 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 CGNQ9P2M7 1197 aaKnown RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 PPP1R1BQ9UD71 204 aaPredicted RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 KCNH3Q9ULD8 1083 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 PLAGL2Q9UPG8 496 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 KIF3AQ9Y496 699 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 PRDM2Q13029 1718 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 BAZ1BQ9UIG0 1483 aaKnown RBP5.84□□□□□ -1.47
MDM2-226ENST00000540352 CEP164Q9UPV0 1460 aa5.84□□□□□ -1.47
MDM2-226ENST00000540352 TULP2O00295 520 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 ZNF500O60304 480 aaPredicted RBP5.83□□□□□ -1.48
MDM2-226ENST00000540352 CLEC3AO75596 197 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 PRNPP04156 253 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 MSNP26038 577 aaKnown RBP5.83□□□□□ -1.48
MDM2-226ENST00000540352 MCM5P33992 734 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 SOX9P48436 509 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 RNF4P78317 190 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 SATB1Q01826 763 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 PRKCQQ04759 706 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 LMOD3Q0VAK6 560 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 BNIP3Q12983 259 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 IKZF1Q13422 519 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 SASS6Q6UVJ0 657 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 ZNF574Q6ZN55 896 aaPredicted RBP5.83□□□□□ -1.48
MDM2-226ENST00000540352 C22orf34Q6ZV56 151 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 CREBRFQ8IUR6 639 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 BCL7CQ8WUZ0 217 aaPredicted RBP5.83□□□□□ -1.48
MDM2-226ENST00000540352 TIGD1Q96MW7 591 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 ASPNQ9BXN1 380 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.83□□□□□ -1.48
MDM2-226ENST00000540352 GRPEL1Q9HAV7 217 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 RBM28Q9NW13 759 aaKnown RBP5.83□□□□□ -1.48
MDM2-226ENST00000540352 CCDC144AA2RUR9 1427 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 WDR97A6NE52 1622 aa5.83□□□□□ -1.48
MDM2-226ENST00000540352 MAFGO15525 162 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 UBOX5O94941 541 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 SSBP05455 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
MDM2-226ENST00000540352 CD96P40200 585 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 TNK2Q07912 1038 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 NKPD1Q17RQ9 610 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 NAALADL2Q58DX5 795 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 LSRQ86X29 649 aaPredicted RBP5.82□□□□□ -1.48
MDM2-226ENST00000540352 ASB11Q8WXH4 323 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 SEC16BQ96JE7 1060 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 FBXL18Q96ME1 805 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 HSPA12BQ96MM6 686 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 PPP1R9BQ96SB3 815 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 MYCBPQ99417 103 aaPredicted RBP5.82□□□□□ -1.48
MDM2-226ENST00000540352 TM9SF2Q99805 663 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 MKRN2Q9H000 416 aaKnown RBP5.82□□□□□ -1.48
MDM2-226ENST00000540352 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
MDM2-226ENST00000540352 TNKS2Q9H2K2 1166 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 CALCOCO1Q9P1Z2 691 aa5.82□□□□□ -1.48
MDM2-226ENST00000540352 VAV3Q9UKW4 847 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms