RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
HMGA2-209ENST00000539662 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 B4E1Z4 1266 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 KDM4AO75164 1064 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 GNRH1P01148 92 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 CYP21A2P08686 494 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 TRIM32Q13049 653 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 MTFR1Q15390 333 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 GPR142Q7Z601 462 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 REPS2Q8NFH8 660 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 ARMC5Q96C12 935 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
HMGA2-209ENST00000539662 LSG1Q9H089 658 aaKnown RBP12.67□□□□□ -0.38
HMGA2-209ENST00000539662 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
HMGA2-209ENST00000539662 MCCP23508 829 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 IMMTQ16891 758 aaKnown RBP12.66□□□□□ -0.38
HMGA2-209ENST00000539662 SLC9C1Q4G0N8 1177 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 PPP1R9AQ9ULJ8 1098 aa12.66□□□□□ -0.38
HMGA2-209ENST00000539662 TNRC18O15417 2968 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-209ENST00000539662 VWA5AO00534 786 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 ADCY3O60266 1144 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-209ENST00000539662 CYP2B6P20813 491 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 HOXD10P28358 340 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 GRK4P32298 578 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 SNAP25P60880 206 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 PLS1Q14651 629 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 CCL14Q16627 93 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 MORN1Q5T089 497 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 WDR78Q5VTH9 848 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 KCTD1Q719H9 257 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 USP6NLQ92738 828 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 COA7Q96BR5 231 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
HMGA2-209ENST00000539662 RBM8AQ9Y5S9 174 aaKnown RBP12.65□□□□□ -0.38
HMGA2-209ENST00000539662 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 TMEM232C9JQI7 657 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 BMP3P12645 472 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 ERCC3P19447 782 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 PRMT2P55345 433 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
HMGA2-209ENST00000539662 TRIB2Q92519 343 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 SLF1Q9BQI6 1058 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
HMGA2-209ENST00000539662 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 FLRT1Q9NZU1 646 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
HMGA2-209ENST00000539662 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
HMGA2-209ENST00000539662 ZNFX1Q9P2E3 1918 aaKnown RBP12.64□□□□□ -0.39
HMGA2-209ENST00000539662 KIAA0100Q14667 2235 aaKnown RBP12.64□□□□□ -0.39
HMGA2-209ENST00000539662 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
HMGA2-209ENST00000539662 E7EWF7 191 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 INHAP05111 366 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
HMGA2-209ENST00000539662 PTPREP23469 700 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 MAPK4P31152 587 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 SLC16A2P36021 539 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 IRF5Q13568 498 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 ESR2Q92731 530 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 UNC93B1Q9H1C4 597 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 CPVLQ9H3G5 476 aa12.63□□□□□ -0.39
HMGA2-209ENST00000539662 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
HMGA2-209ENST00000539662 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
HMGA2-209ENST00000539662 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
HMGA2-209ENST00000539662 COBLO75128 1261 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
HMGA2-209ENST00000539662 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
HMGA2-209ENST00000539662 SLC1A4P43007 532 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 CPXCR1Q8N123 301 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 ENAHQ8N8S7 591 aaPredicted RBP12.62□□□□□ -0.39
HMGA2-209ENST00000539662 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
HMGA2-209ENST00000539662 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 RAVER2Q9HCJ3 691 aaKnown RBP12.62□□□□□ -0.39
HMGA2-209ENST00000539662 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms