RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PORCNQ9H237 461 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
TSPAN4-220ENST00000532375 KDM4AO75164 1064 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 FCGRTP55899 365 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 ESR2Q92731 530 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 TTC14Q96N46 770 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 CENPFP49454 3210 aa16.46■□□□□ 0.23
TSPAN4-220ENST00000532375 FLOT1O75955 427 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 PRMT2P55345 433 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 RASGRP2Q7LDG7 609 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 ZKSCAN3Q9BRR0 538 aa16.45■□□□□ 0.22
TSPAN4-220ENST00000532375 E7EWF7 191 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 MCCP23508 829 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 PRKCZQ05513 592 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 USP6NLQ92738 828 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 KRT23Q9C075 422 aa16.44■□□□□ 0.22
TSPAN4-220ENST00000532375 VWA5AO00534 786 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 SLC27A2O14975 620 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 BMP3P12645 472 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 HOXD10P28358 340 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 FLT3LGP49771 235 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 SEC23AQ15436 765 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 MB21D1Q8N884 522 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 ARMC5Q96C12 935 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-220ENST00000532375 SMCHD1A6NHR9 2005 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 RAD21O60216 631 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 PLA2G6O60733 806 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 CAPN15O75808 1086 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 IRF5Q13568 498 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 ZNF214Q9UL59 606 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-220ENST00000532375 MAPK4P31152 587 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 ANTXR2P58335 489 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 MORN1Q5T089 497 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 GPR142Q7Z601 462 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 COA7Q96BR5 231 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
TSPAN4-220ENST00000532375 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 ATP2A1O14983 1001 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 PDHBP11177 359 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 SLC1A4P43007 532 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 IQCA1Q86XH1 822 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 TNKSO95271 1327 aa16.4■□□□□ 0.22
TSPAN4-220ENST00000532375 ERCC3P19447 782 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 PTPREP23469 700 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 CCNA1P78396 465 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 TSGA10IPQ3SY00 556 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 RIOX2Q8IUF8 465 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 PXYLP1Q8TE99 480 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 KCNB2Q92953 911 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 ZNF536O15090 1300 aa16.39■□□□□ 0.21
TSPAN4-220ENST00000532375 CCDC85CA6NKD9 419 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 IGHA2P01877 340 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 GRK4P32298 578 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 STAT3P40763 770 aa16.38■□□□□ 0.21
TSPAN4-220ENST00000532375 ZNF543Q08ER8 600 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms