RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 FUCA2Q9BTY2 467 aa19.14■□□□□ 0.65
CAPRIN1-207ENST00000529307 FOXP1Q9H334 677 aaPredicted RBP19.14■□□□□ 0.65
CAPRIN1-207ENST00000529307 TDRD3Q9H7E2 651 aaKnown RBP19.14■□□□□ 0.65
CAPRIN1-207ENST00000529307 PSME4Q14997 1843 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 IGKV6D-41A0A0C4DH26 115 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 PTPAQ15257 358 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SAFBQ15424 915 aaKnown RBP eCLIP19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 GMLQ99445 158 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SGIP1Q9BQI5 828 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 PALM3A6NDB9 673 aaPredicted RBP19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 CYTH3O43739 400 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SNW1Q13573 536 aaKnown RBP19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SLC39A14Q15043 492 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 NUP62CLQ9H1M0 184 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SWAP70Q9UH65 585 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 ZBTB12Q9Y330 459 aaPredicted RBP19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 SIPA1L1O43166 1804 aa19.13■□□□□ 0.65
CAPRIN1-207ENST00000529307 GOLGA8HP0CJ92 632 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 CLSTN2Q9H4D0 955 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 MTMR4Q9NYA4 1195 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 PPP1R1BQ9UD71 204 aaPredicted RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 UTRNP46939 3433 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 FAM205CA6NFA0 338 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 FAM196BA6NMK8 535 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 HLA-DOAP06340 250 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 SCG2P13521 617 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 BRD2P25440 801 aaKnown RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 PFKFB3Q16875 520 aaPredicted RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 DALRD3Q5D0E6 543 aaKnown RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 EARS2Q5JPH6 523 aaKnown RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 AXDND1Q5T1B0 1012 aaPredicted RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 ADALQ6DHV7 355 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 EHD4Q9H223 541 aa19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 DDX19AQ9NUU7 478 aaKnown RBP19.12■□□□□ 0.65
CAPRIN1-207ENST00000529307 ADAMTS3O15072 1205 aa19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 CPVLQ9H3G5 476 aa19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 MMP14P50281 582 aa19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 NOM1Q5C9Z4 860 aaKnown RBP19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 FSIP1Q8NA03 581 aa19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 FEZ2Q9UHY8 353 aaPredicted RBP19.11■□□□□ 0.65
CAPRIN1-207ENST00000529307 MYO3BQ8WXR4 1341 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 A0A1W2PQ27 194 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 A0A1W2PQ64 194 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 A0A1W2PQD8 194 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 SMTNL1A8MU46 457 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 XBP1P17861 261 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 SHROOM1Q2M3G4 852 aaPredicted RBP19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 SOGA3Q5TF21 947 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 USP17L2Q6R6M4 530 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 FAM53CQ9NYF3 392 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 ZNRF3Q9ULT6 936 aa19.1■□□□□ 0.65
CAPRIN1-207ENST00000529307 RBM43Q6ZSC3 357 aaKnown RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 CKAP2LQ8IYA6 745 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 TNFRSF25Q93038 417 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 VPS33BQ9H267 617 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 DHX36Q9H2U1 1008 aaKnown RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 GEMIN8Q9NWZ8 242 aaKnown RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 BRCA1P38398 1863 aaKnown RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 A0A1B0GVL5 298 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 USP17L5A8MUK1 530 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 KRT2P35908 639 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 GNAQP50148 359 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 TYW1BQ6NUM6 668 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.651e-8■■□□□ 12.3
CAPRIN1-207ENST00000529307 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 CABP5Q9NP86 173 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 PYCARDQ9ULZ3 195 aa19.09■□□□□ 0.65
CAPRIN1-207ENST00000529307 SPDYE2BA6NHP3 402 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 KLRF2D3W0D1 207 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 NFKBIEO00221 500 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 SPDYE6P0CI01 402 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 MAP3K11Q16584 847 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 NIM1KQ8IY84 436 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 MRPS27Q92552 414 aaKnown RBP19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 PI4KBQ9UBF8 816 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 PCDHB6Q9Y5E3 794 aa19.08■□□□□ 0.65
CAPRIN1-207ENST00000529307 ERICH4A6NGS2 130 aa19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 NDUFA8P51970 172 aa19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 FAM160A1Q05DH4 1040 aa19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 FMR1NBQ8N0W7 255 aaPredicted RBP19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 UPF1Q92900 1129 aaKnown RBP eCLIP19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 MYH8P13535 1937 aa19.08■□□□□ 0.64
CAPRIN1-207ENST00000529307 PPP6R2O75170 966 aa19.07■□□□□ 0.64
CAPRIN1-207ENST00000529307 PARP1P09874 1014 aaKnown RBP19.07■□□□□ 0.64
CAPRIN1-207ENST00000529307 PTGER2P43116 358 aa19.07■□□□□ 0.64
CAPRIN1-207ENST00000529307 CXCL9Q07325 125 aa19.07■□□□□ 0.64
CAPRIN1-207ENST00000529307 RILPL1Q5EBL4 403 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms