RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 RIOX2Q8IUF8 465 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 KBTBD3Q8NAB2 608 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 TRPV1Q8NER1 839 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 LBHD1Q9BQE6 289 aaPredicted RBP20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 ZNF287Q9HBT7 754 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 PRKAG2Q9UGJ0 569 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 ROBO3Q96MS0 1386 aa20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
CKLF-CMTM1-202ENST00000527845 COBLO75128 1261 aa20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 TMEM132BQ14DG7 1078 aa20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 APPBP2Q92624 585 aa20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MAML3Q96JK9 1138 aa20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 STRBPQ96SI9 672 aaKnown RBP20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 PPP1R9AQ9ULJ8 1098 aa20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 DIS3Q9Y2L1 958 aaKnown RBP20.95■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 PLXNA1Q9UIW2 1896 aa20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 GNAT2P19087 354 aa20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 KCTD2Q14681 263 aa20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SAMD1Q6SPF0 538 aaPredicted RBP20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MMP19Q99542 508 aa20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 LAMA3Q16787 3333 aa20.94■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 VWA5AO00534 786 aa20.93■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 DCTPP1Q9H773 170 aa20.93■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MKNK2Q9HBH9 465 aa20.93■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 NYAP2Q9P242 653 aa20.93■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 CHGBP05060 677 aa20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 STAT3P40763 770 aa20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 RTP1P59025 263 aa20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MDM2Q00987 491 aaPredicted RBP20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 C20orf194Q5TEA3 1177 aa20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 LTBP2Q14767 1821 aa20.92■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 GSG1L2A8MUP6 293 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SMIM22K7EJ46 135 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 RNF113AO15541 343 aaKnown RBP20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 RAD21O60216 631 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 RASA1P20936 1047 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 ATN1P54259 1190 aaPredicted RBP20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 FAM83BQ5T0W9 1011 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 GJC2Q5T442 439 aaPredicted RBP20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 DEFB123Q8N688 67 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SLF1Q9BQI6 1058 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 FBXO28Q9NVF7 368 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 ZNF214Q9UL59 606 aaPredicted RBP20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SYNPO2Q9UMS6 1093 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MYH4Q9Y623 1939 aa20.91■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 TTC41PQ6P2S7 1318 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 GPAA1O43292 621 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SNX17Q15036 470 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 C1orf53Q5VUE5 145 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MSL3Q8N5Y2 521 aaKnown RBP20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 TINF2Q9BSI4 451 aa20.9■□□□□ 0.94
CKLF-CMTM1-202ENST00000527845 MINDY4BA8MYZ0 360 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ERC2O15083 957 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 RARBP10826 455 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TDO2P48775 406 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 REPS2Q8NFH8 660 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 OSBP2Q969R2 916 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 TEX13BQ9BXU2 312 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 LRRC41Q15345 812 aa20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ZNF792Q3KQV3 632 aa20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PRPF38AQ8NAV1 312 aaKnown RBP20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 SLC17A8Q8NDX2 589 aa20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 NACAP1Q9BZK3 213 aa20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 CTDP1Q9Y5B0 961 aaPredicted RBP20.88■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 F5H6K3 240 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ATP2A1O14983 1001 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 AKR1A1P14550 325 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 KLRC3Q07444 240 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 FAM47AQ5JRC9 791 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PRAMEF19Q5SWL8 479 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 RNF180Q86T96 592 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 XPNPEP3Q9NQH7 507 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PLIN4Q96Q06 1357 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 NDUFB10O96000 172 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 MYCNP04198 464 aaPredicted RBP20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 APPP05067 770 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PGK2P07205 417 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PPP4R3BQ5MIZ7 849 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 FAM109BQ6ICB4 259 aaPredicted RBP20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 SNRNP48Q6IEG0 339 aaKnown RBP20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PHF24Q9UPV7 400 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 STXBP5LQ9Y2K9 1186 aa20.86■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 SYNGAP1Q96PV0 1343 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 IGKV6D-41A0A0C4DH26 115 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ZBED4O75132 1171 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 FDX1P10109 184 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 ADCYAP1R1P41586 468 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 PDE4BQ07343 736 aa20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.85■□□□□ 0.93
CKLF-CMTM1-202ENST00000527845 MKL1Q969V6 931 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms