RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 ARMT1Q9H993 441 aa16.72■□□□□ 0.27
CSTF3-206ENST00000524827 XPNPEP3Q9NQH7 507 aa16.72■□□□□ 0.27
CSTF3-206ENST00000524827 NRBP1Q9UHY1 535 aa16.72■□□□□ 0.27
CSTF3-206ENST00000524827 BAZ2AQ9UIF9 1905 aaKnown RBP16.72■□□□□ 0.27
CSTF3-206ENST00000524827 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 SLC25A27O95847 323 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 RARBP10826 455 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 ITGB8P26012 769 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
CSTF3-206ENST00000524827 MMP19Q99542 508 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 ROBO3Q96MS0 1386 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 CDH23Q9H251 3354 aa16.71■□□□□ 0.27
CSTF3-206ENST00000524827 SPTBN5Q9NRC6 3674 aaKnown RBP16.71■□□□□ 0.26
CSTF3-206ENST00000524827 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 SMIM22K7EJ46 135 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 PRKAB2O43741 272 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 PGK1P00558 417 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 PGK2P07205 417 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 CLTBP09497 229 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 TAL1P17542 331 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-206ENST00000524827 EPHB4P54760 987 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
CSTF3-206ENST00000524827 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 ADAMTS5Q9UNA0 930 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 TACC3Q9Y6A5 838 aa16.7■□□□□ 0.26
CSTF3-206ENST00000524827 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 A0A1W2PQ45 241 aaPredicted RBP16.69■□□□□ 0.26
CSTF3-206ENST00000524827 A0A1W2PQY0 241 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 APBB1O00213 710 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 MBD4O95243 580 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 FOSL2P15408 326 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 RNF180Q86T96 592 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
CSTF3-206ENST00000524827 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 TINF2Q9BSI4 451 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
CSTF3-206ENST00000524827 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 PQBP1O60828 265 aaKnown RBP16.68■□□□□ 0.26
CSTF3-206ENST00000524827 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
CSTF3-206ENST00000524827 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
CSTF3-206ENST00000524827 ADD2P35612 726 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 CDK8P49336 464 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 KCTD2Q14681 263 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 C12orf60Q5U649 245 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 LENG1Q96BZ8 264 aaPredicted RBP16.68■□□□□ 0.26
CSTF3-206ENST00000524827 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
CSTF3-206ENST00000524827 DIS3Q9Y2L1 958 aaKnown RBP16.68■□□□□ 0.26
CSTF3-206ENST00000524827 VWA5AO00534 786 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 ZNF865P0CJ78 1059 aaPredicted RBP16.67■□□□□ 0.26
CSTF3-206ENST00000524827 AKR1A1P14550 325 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 RAG1P15918 1043 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 PANK1Q8TE04 598 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 ZNF214Q9UL59 606 aaPredicted RBP16.67■□□□□ 0.26
CSTF3-206ENST00000524827 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
CSTF3-206ENST00000524827 USP17L12C9JPN9 530 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 USP17L21D6R901 530 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 COPB2P35606 906 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 STAT3P40763 770 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 FPGSQ05932 587 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 FAM83BQ5T0W9 1011 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 KANSL2Q9H9L4 492 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 TMEM39AQ9NV64 488 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
CSTF3-206ENST00000524827 RAD21O60216 631 aa16.65■□□□□ 0.26
CSTF3-206ENST00000524827 CHGBP05060 677 aa16.65■□□□□ 0.26
CSTF3-206ENST00000524827 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
CSTF3-206ENST00000524827 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
CSTF3-206ENST00000524827 ACLYP53396 1101 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 FAAP100Q0VG06 881 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 TOX2Q96NM4 488 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 TSEN34Q9BSV6 310 aaKnown RBP16.64■□□□□ 0.25
CSTF3-206ENST00000524827 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.25
CSTF3-206ENST00000524827 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 MYH7P12883 1935 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
CSTF3-206ENST00000524827 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
CSTF3-206ENST00000524827 DNAJB2P25686 324 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSTF3-206ENST00000524827 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSTF3-206ENST00000524827 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 PRDM6Q9NQX0 595 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 SYNGAP1Q96PV0 1343 aa16.63■□□□□ 0.25
CSTF3-206ENST00000524827 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms