RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
SDC2-203ENST00000519587 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 BEGAINQ9BUH8 593 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 NID2Q14112 1375 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 CETPP11597 493 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 SLC1A4P43007 532 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 SH3D19Q5HYK7 790 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 PROCA1Q8NCQ7 364 aaPredicted RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 RBM28Q9NW13 759 aaKnown RBP16.49■□□□□ 0.23
SDC2-203ENST00000519587 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
SDC2-203ENST00000519587 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
SDC2-203ENST00000519587 PDHBP11177 359 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 BMP3P12645 472 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 GNAQP50148 359 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 TROAPQ12815 778 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
SDC2-203ENST00000519587 BECN1Q14457 450 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 GRM4Q14833 912 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 RTN1Q16799 776 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 SNX21Q969T3 373 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
SDC2-203ENST00000519587 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
SDC2-203ENST00000519587 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 VCAM1P19320 739 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
SDC2-203ENST00000519587 GJA5P36382 358 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
SDC2-203ENST00000519587 GADL1Q6ZQY3 521 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 TPCN1Q9ULQ1 816 aa16.47■□□□□ 0.23
SDC2-203ENST00000519587 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
SDC2-203ENST00000519587 CPLX1O14810 134 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 PFKFB2O60825 505 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 SREBF2Q12772 1141 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.23
SDC2-203ENST00000519587 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
SDC2-203ENST00000519587 NOGQ13253 232 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 CCL15Q16663 113 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
SDC2-203ENST00000519587 MYH6P13533 1939 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 CDKL5O76039 1030 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 RXRAP19793 462 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 STAT2P52630 851 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 STK3Q13188 491 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 CHURC1Q8WUH1 139 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 LARP6Q9BRS8 491 aaKnown RBP16.45■□□□□ 0.22
SDC2-203ENST00000519587 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
SDC2-203ENST00000519587 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
SDC2-203ENST00000519587 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
SDC2-203ENST00000519587 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
SDC2-203ENST00000519587 INHBEP58166 350 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
SDC2-203ENST00000519587 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 GRM1Q13255 1194 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 ME3Q16798 604 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
SDC2-203ENST00000519587 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
SDC2-203ENST00000519587 MCOLN1Q9GZU1 580 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 GPCPD1Q9NPB8 672 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 TSKSQ9UJT2 592 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 MYPNQ86TC9 1320 aa16.44■□□□□ 0.22
SDC2-203ENST00000519587 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
SDC2-203ENST00000519587 TMEM232C9JQI7 657 aa16.43■□□□□ 0.22
SDC2-203ENST00000519587 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms