RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 ZNF654Q8IZM8 581 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 PROCA1Q8NCQ7 364 aaPredicted RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 CHURC1Q8WUH1 139 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 NUP133Q8WUM0 1156 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 CNKSR2Q8WXI2 1034 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 C12orf42Q96LP6 360 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 LZTS2Q9BRK4 669 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 GPHNQ9NQX3 736 aaPredicted RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 NAP1L2Q9ULW6 460 aaPredicted RBP8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 MYH4Q9Y623 1939 aa8.25□□□□□ -1.09
SCARNA6-201ENST00000515982 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 CA12O43570 354 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 DHX16O60231 1041 aaKnown RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 PLA2G6O60733 806 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 PDHBP11177 359 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 BMP3P12645 472 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 OSBPP22059 807 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SMARCA1P28370 1054 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 GJA5P36382 358 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 HMGCS2P54868 508 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SREBF2Q12772 1141 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 TROAPQ12815 778 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 NOGQ13253 232 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 COL9A3Q14050 684 aaPredicted RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 GRM4Q14833 912 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 ASPRV1Q53RT3 343 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 CPLX2Q6PUV4 134 aaKnown RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 APOA5Q6Q788 366 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 GADL1Q6ZQY3 521 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 FAM160B2Q86V87 743 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 FANCBQ8NB91 859 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SNX21Q969T3 373 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SLKQ9H2G2 1235 aaPredicted RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 SH2B1Q9NRF2 756 aaPredicted RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 EMILIN3Q9NT22 766 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 RBM28Q9NW13 759 aaKnown RBP8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 HOXC10Q9NYD6 342 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 FEM1BQ9UK73 627 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 BRPF3Q9ULD4 1205 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
SCARNA6-201ENST00000515982 CCL15-CCL14A0A0B4J2E2 113 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 GOLGA8AA7E2F4 631 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 GOLGA8BA8MQT2 603 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 FAM155AB1AL88 458 aaPredicted RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 FDX1P10109 184 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 HOXA7P31268 230 aaPredicted RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 TM4SF4P48230 202 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 METAP2P50579 478 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 ZNF543Q08ER8 600 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 MKRN3Q13064 507 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 COG2Q14746 738 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 ZYXQ15942 572 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 CCL15Q16663 113 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 RTN1Q16799 776 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 CCDC96Q2M329 555 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 ANKRD23Q86SG2 305 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 HSCBQ8IWL3 235 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 SPICE1Q8N0Z3 855 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 ZCCHC17Q9NP64 241 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 PNMA3Q9UL41 463 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 TPCN1Q9ULQ1 816 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 AGTPBP1Q9UPW5 1226 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 SLC45A1Q9Y2W3 748 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 PHIPQ8WWQ0 1821 aa8.23□□□□□ -1.09
SCARNA6-201ENST00000515982 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 KLRF2D3W0D1 207 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 CPLX1O14810 134 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 PFKFB2O60825 505 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 CDKL5O76039 1030 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 ALDH1A1P00352 501 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 VCAM1P19320 739 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 STAT2P52630 851 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 SOX10P56693 466 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 KIF23Q02241 960 aaPredicted RBP8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 IKQ13123 557 aaPredicted RBP8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 BECN1Q14457 450 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 FAM83BQ5T0W9 1011 aa8.22□□□□□ -1.09
SCARNA6-201ENST00000515982 BTNL9Q6UXG8 535 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms