RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
CAST-242ENST00000515063 BIVM-ERCC5R4GMW8 1640 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 CEP164Q9UPV0 1460 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 DNAJC25-GNG10A0A024R161 153 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 SSU72P8A0A1W2PR75 194 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 FITM1A5D6W6 292 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 LRRC10BA6NIK2 292 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 HK2P52789 917 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 PCBP3P57721 371 aaKnown RBP5.6□□□□□ -1.51
CAST-242ENST00000515063 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 INTS3Q68E01 1043 aaKnown RBP5.6□□□□□ -1.51
CAST-242ENST00000515063 RNF111Q6ZNA4 994 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 LILRA2Q8N149 483 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 TAB3Q8N5C8 712 aaPredicted RBP5.6□□□□□ -1.51
CAST-242ENST00000515063 ZNF655Q8N720 491 aaPredicted RBP5.6□□□□□ -1.51
CAST-242ENST00000515063 ABHD4Q8TB40 342 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 MYLIPQ8WY64 445 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 MKRN2Q9H000 416 aaKnown RBP5.6□□□□□ -1.51
CAST-242ENST00000515063 C19orf73Q9NVV2 129 aa5.6□□□□□ -1.51
CAST-242ENST00000515063 TOP2BQ02880 1626 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 CEP162Q5TB80 1403 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 POLR2BP30876 1174 aaKnown RBP5.59□□□□□ -1.51
CAST-242ENST00000515063 RALGPS1Q5JS13 557 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 FBXW10Q5XX13 1052 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 KSR1Q8IVT5 923 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 SMARCC1Q92922 1105 aaPredicted RBP5.59□□□□□ -1.51
CAST-242ENST00000515063 SLC6A18Q96N87 628 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 CRBNQ96SW2 442 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 ADAMTS10Q9H324 1103 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 PRR13Q9NZ81 148 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 PCDHB12Q9Y5F1 795 aa5.59□□□□□ -1.51
CAST-242ENST00000515063 SYNJ1O43426 1573 aa5.59□□□□□ -1.52
CAST-242ENST00000515063 SOGA1O94964 1423 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 PRDM2Q13029 1718 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 SHISA3A0PJX4 238 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 WASH4PA8MWX3 477 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 HPXP02790 462 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 BBS9Q3SYG4 887 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 FYB2Q5VWT5 728 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 ANKS4BQ8N8V4 417 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 RBBP8NLQ8NC74 664 aaPredicted RBP5.58□□□□□ -1.52
CAST-242ENST00000515063 BHLHE22Q8NFJ8 381 aaPredicted RBP5.58□□□□□ -1.52
CAST-242ENST00000515063 FAM84AQ96KN4 292 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 HDAC8Q9BY41 377 aa5.58□□□□□ -1.52
CAST-242ENST00000515063 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
CAST-242ENST00000515063 SIGLEC6O43699 453 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 ZGLP1P0C6A0 271 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 RACK1P63244 317 aaKnown RBP5.57□□□□□ -1.52
CAST-242ENST00000515063 PAK2Q13177 524 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 NR0B2Q15466 257 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 MLANAQ16655 118 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 NT5DC4Q86YG4 428 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 GPRASP2Q96D09 838 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 PPP1R16BQ96T49 567 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 SLC9A7Q96T83 725 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 ANTXR1Q9H6X2 564 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 SUCOQ9UBS9 1254 aaKnown RBP5.57□□□□□ -1.52
CAST-242ENST00000515063 FBXL21Q9UKT6 434 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 SLC12A7Q9Y666 1083 aa5.57□□□□□ -1.52
CAST-242ENST00000515063 C8AP07357 584 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 TEKQ02763 1124 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 SNX17Q15036 470 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 TMC3Q7Z5M5 1100 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 METTL16Q86W50 562 aaKnown RBP5.56□□□□□ -1.52
CAST-242ENST00000515063 TMEM192Q8IY95 271 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 CCDC144CPQ8IYA2 1237 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 RGS22Q8NE09 1264 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 OR6P1Q8NGX9 317 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 RASGRP4Q8TDF6 673 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 TCTN2Q96GX1 697 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
CAST-242ENST00000515063 ZNF512BQ96KM6 892 aaPredicted RBP5.56□□□□□ -1.52
CAST-242ENST00000515063 PRDM14Q9GZV8 571 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 CWC22Q9HCG8 908 aaKnown RBP5.56□□□□□ -1.52
CAST-242ENST00000515063 CHST7Q9NS84 486 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 ZMYM5Q9UJ78 669 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 TCFL5Q9UL49 500 aa5.56□□□□□ -1.52
CAST-242ENST00000515063 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.56□□□□□ -1.52
CAST-242ENST00000515063 ERICH3Q5RHP9 1530 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 RUSC2Q8N2Y8 1516 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 PRAMEF1O95521 474 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 RPL10P27635 214 aaKnown RBP5.55□□□□□ -1.52
CAST-242ENST00000515063 SOX9P48436 509 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 PMS1P54277 932 aaKnown RBP5.55□□□□□ -1.52
CAST-242ENST00000515063 HDLBPQ00341 1268 aaKnown RBP5.55□□□□□ -1.52
CAST-242ENST00000515063 AUHQ13825 339 aaKnown RBP5.55□□□□□ -1.52
CAST-242ENST00000515063 WAPLQ7Z5K2 1190 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 TGIF2Q9GZN2 237 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 SLC6A17Q9H1V8 727 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 EPB41L4BQ9H329 900 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
CAST-242ENST00000515063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 SYPP08247 313 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 KIR2DL1P43626 348 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms