RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 DPPA5A6NC42 116 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 FOXO6A8MYZ6 492 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 H0Y3Z8 333 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 PECAM1P16284 738 aaPredicted RBP8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 IGHMBP2P38935 993 aaKnown RBP8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 ABL2P42684 1182 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 ADCY1Q08828 1119 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 LAMB3Q13751 1172 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 KRT32Q14532 448 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 RRAGBQ5VZM2 374 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 MIS18BP1Q6P0N0 1132 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 PI16Q6UXB8 463 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 MPRIPQ6WCQ1 1025 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 MICALCLQ6ZW33 695 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 SPATA4Q8NEY3 305 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 SLC26A6Q9BXS9 759 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 A1CFQ9NQ94 594 aaKnown RBP8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 MYO1AQ9UBC5 1043 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 NOVA2Q9UNW9 492 aaKnown RBP8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 PLAAQ9Y263 795 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 HYOU1Q9Y4L1 999 aa8.09□□□□□ -1.12
LIMCH1-207ENST00000508466 GOLGA8KD6RF30 607 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 IPO7O95373 1038 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 YEATS4O95619 227 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 SHBGP04278 402 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CTCFP49711 727 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 RWDD2BP57060 319 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 FILIP1LQ4L180 1135 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 OXER1Q8TDS5 423 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CCDC113Q9H0I3 377 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 OCEL1Q9H607 264 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 ZNF609O15014 1411 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 ZMYM6O95789 1325 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 KIF3CO14782 793 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 MAGEA10P43363 369 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 PTPAQ15257 358 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 RNF220Q5VTB9 566 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CYP26C1Q6V0L0 522 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CADPS2Q86UW7 1296 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 B4GALNT2Q8NHY0 566 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CUL5Q93034 780 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 KRT12Q99456 494 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 EPAS1Q99814 870 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 CSRNP2Q9H175 543 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 HMG20BQ9P0W2 317 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 STIM2Q9P246 746 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 ZMYND8Q9ULU4 1186 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 GDAQ9Y2T3 454 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 SYNRGQ9UMZ2 1314 aa8.08□□□□□ -1.12
LIMCH1-207ENST00000508466 YY1P25490 414 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 FLT3P36888 993 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 TTLL7Q6ZT98 887 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 TAX1BP1Q86VP1 789 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 SYCP3Q8IZU3 236 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 ENOX1Q8TC92 643 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 MGARPQ8TDB4 240 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 NUDT16Q96DE0 195 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 ELAC2Q9BQ52 826 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 UBAC1Q9BSL1 405 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 CABP5Q9NP86 173 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 PAPOLBQ9NRJ5 636 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 U3KPZ7 1027 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 DUOX2Q9NRD8 1548 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 UNC13BO14795 1591 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 GMNCA6NCL1 334 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 FTCDO95954 541 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 SESN3P58005 492 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 ARID5AQ03989 594 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 RRP12Q5JTH9 1297 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 RESP18Q5W5W9 173 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 ADAT2Q7Z6V5 191 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 CREG2Q8IUH2 290 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 TMTC1Q8IUR5 882 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 KIAA0825Q8IV33 1275 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 RAPGEF5Q92565 580 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 LLPHQ9BRT6 129 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 ATP6V0A4Q9HBG4 840 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 HPSEQ9Y251 543 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 CRB1P82279 1406 aa8.07□□□□□ -1.12
LIMCH1-207ENST00000508466 M0R2C6 588 aa8.06□□□□□ -1.12
LIMCH1-207ENST00000508466 HEXIM1O94992 359 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-207ENST00000508466 FAM107AO95990 144 aa8.06□□□□□ -1.12
LIMCH1-207ENST00000508466 BYSLQ13895 437 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-207ENST00000508466 C8orf74Q6P047 294 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms