RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
TPM3-218ENST00000505010 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 FAM184AQ8NB25 1140 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CEP95Q96GE4 821 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CCDC17Q96LX7 622 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 FZD1Q9UP38 647 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 RBBP6Q7Z6E9 1792 aaKnown RBP10.89□□□□□ -0.67
TPM3-218ENST00000505010 IGKV6D-41A0A0C4DH26 115 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
TPM3-218ENST00000505010 CDC27P30260 824 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 FOSBP53539 338 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 PKP1Q13835 747 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
TPM3-218ENST00000505010 TATDN1Q6P1N9 297 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 METTL16Q86W50 562 aaKnown RBP10.88□□□□□ -0.67
TPM3-218ENST00000505010 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
TPM3-218ENST00000505010 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
TPM3-218ENST00000505010 ANKS1AQ92625 1134 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 WNK4Q96J92 1243 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 TMEM47Q9BQJ4 181 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM3-218ENST00000505010 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 KIF3AQ9Y496 699 aa10.88□□□□□ -0.67
TPM3-218ENST00000505010 OTOFQ9HC10 1997 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 VPS37CA5D8V6 355 aaPredicted RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 UNCXA6NJT0 531 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 PDCP20941 246 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 SYT1P21579 422 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 SHROOM1Q2M3G4 852 aaPredicted RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 LRRC47Q8N1G4 583 aaKnown RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 DPF3Q92784 378 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 CLMNQ96JQ2 1002 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 DEFB129Q9H1M3 183 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
TPM3-218ENST00000505010 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
TPM3-218ENST00000505010 STX6O43752 255 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 TBC1D12O60347 775 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 PLEKHA8P1O95397 391 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 TTLL1O95922 423 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 MYCP01106 439 aaPredicted RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 GH2P01242 217 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 KIF5BP33176 963 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 ICA1Q05084 483 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 TROAPQ12815 778 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 RRP1BQ14684 758 aaKnown RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 GRM4Q14833 912 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 SEPT2Q15019 361 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 LARP1BQ659C4 914 aaKnown RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 PHKBQ93100 1093 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 SLC26A6Q9BXS9 759 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 CABP5Q9NP86 173 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 ORC3Q9UBD5 711 aaPredicted RBP10.86□□□□□ -0.67
TPM3-218ENST00000505010 PTCH2Q9Y6C5 1203 aa10.86□□□□□ -0.67
TPM3-218ENST00000505010 STK36Q9NRP7 1315 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 H3BQV1 296 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 BRD1O95696 1058 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 NOVP48745 357 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 CAP1Q01518 475 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 SSRP1Q08945 709 aaKnown RBP10.85□□□□□ -0.67
TPM3-218ENST00000505010 PPP2R5BQ15173 497 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 NTRK3Q16288 839 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 TMTC3Q6ZXV5 915 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 RASGRP2Q7LDG7 609 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 CMTR1Q8N1G2 835 aaKnown RBP10.85□□□□□ -0.67
TPM3-218ENST00000505010 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 KANSL2Q9H9L4 492 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 CLIP2Q9UDT6 1046 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 ZBTB21Q9ULJ3 1066 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 ZDHHC9Q9Y397 364 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 PPP2R3BQ9Y5P8 575 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 LAMA3Q16787 3333 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 SSC5DA1L4H1 1573 aa10.85□□□□□ -0.67
TPM3-218ENST00000505010 CNTNAP5Q8WYK1 1306 aa10.84□□□□□ -0.67
TPM3-218ENST00000505010 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
TPM3-218ENST00000505010 FMNL1O95466 1100 aaPredicted RBP10.84□□□□□ -0.67
TPM3-218ENST00000505010 PARP1P09874 1014 aaKnown RBP10.84□□□□□ -0.67
TPM3-218ENST00000505010 ZSCAN22P10073 491 aaPredicted RBP10.84□□□□□ -0.67
TPM3-218ENST00000505010 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
TPM3-218ENST00000505010 FDPSP14324 419 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms