RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 RAD51AP2Q09MP3 1159 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 TIGD5Q53EQ6 642 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 PRR23BQ6ZRT6 265 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 ABHD4Q8TB40 342 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 SYTL5Q8TDW5 730 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 MYLIPQ8WY64 445 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 TCTN2Q96GX1 697 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 FOXP3Q9BZS1 431 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 MKRN2Q9H000 416 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 C9IYK1 514 aa7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 RAC2P15153 192 aa7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 ZNF124Q15973 351 aa7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 TDRD10Q5VZ19 366 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 KCNK12Q9HB15 430 aa7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-218ENST00000505009 MEIS1O00470 390 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 MESP2Q0VG99 397 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 ZPBP2Q6X784 338 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 DAGLBQ8NCG7 672 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 G6PC3Q9BUM1 346 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 RNF32Q9H0A6 362 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 GFOD1Q9NXC2 390 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 EFR3BQ9Y2G0 817 aa7.88□□□□□ -1.15
UBE2D3-218ENST00000505009 SIGLEC6O43699 453 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 FKTNO75072 461 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 FARP2O94887 1054 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 IMPDH2P12268 514 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 INTS3Q68E01 1043 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 PPFIBP1Q86W92 1011 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 LSRQ86X29 649 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 PDZD8Q8NEN9 1154 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 FAM86C1Q9NVL1 165 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 TCFL5Q9UL49 500 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 ZNF281Q9Y2X9 895 aa7.87□□□□□ -1.15
UBE2D3-218ENST00000505009 TMEM82A0PJX8 343 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 SHOXO15266 292 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 EFEMP2O95967 443 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 SYPP08247 313 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 RPL10P27635 214 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 GALK1P51570 392 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 BBS9Q3SYG4 887 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 UNC5AQ6ZN44 842 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 TM9SF2Q99805 663 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 CHST7Q9NS84 486 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 FBXL21Q9UKT6 434 aa7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 CCDC9Q9Y3X0 531 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-218ENST00000505009 YBX3P16989 372 aaKnown RBP eCLIP7.85□□□□□ -1.154e-8■□□□□ 8.6
UBE2D3-218ENST00000505009 CTSKP43235 329 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 WAPLQ7Z5K2 1190 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 CCDC144CPQ8IYA2 1237 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 TAB3Q8N5C8 712 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 DHX38Q92620 1227 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 ACBD3Q9H3P7 528 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 PCDHB12Q9Y5F1 795 aa7.85□□□□□ -1.15
UBE2D3-218ENST00000505009 NOTOA8MTQ0 251 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 GUCY2CP25092 1073 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 SOX9P48436 509 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 PMS1P54277 932 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 PCBP3P57721 371 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 LINC00116Q8NCU8 138 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 RASGRP4Q8TDF6 673 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 DHRS1Q96LJ7 313 aa7.84□□□□□ -1.15
UBE2D3-218ENST00000505009 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 FITM1A5D6W6 292 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 PSPNO60542 156 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 TP53P04637 393 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 GJA8P48165 433 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 CRTC3Q6UUV7 619 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 OXR1Q8N573 874 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
UBE2D3-218ENST00000505009 SSU72P8A0A1W2PR75 194 aa7.82□□□□□ -1.16
UBE2D3-218ENST00000505009 DUSP4Q13115 394 aa7.82□□□□□ -1.16
UBE2D3-218ENST00000505009 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
UBE2D3-218ENST00000505009 GPR160Q9UJ42 338 aa7.82□□□□□ -1.16
UBE2D3-218ENST00000505009 NASPP49321 788 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-218ENST00000505009 COL9A2Q14055 689 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-218ENST00000505009 NR0B2Q15466 257 aa7.81□□□□□ -1.16
UBE2D3-218ENST00000505009 ANKS4BQ8N8V4 417 aa7.81□□□□□ -1.16
UBE2D3-218ENST00000505009 SHISA4Q96DD7 197 aa7.81□□□□□ -1.16
UBE2D3-218ENST00000505009 MAP6Q96JE9 813 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms