RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TUFT1Q9NNX1 390 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 STARD7Q9NQZ5 370 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 GOLGA8AA7E2F4 631 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 EXTL3O43909 919 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ZEB2O60315 1214 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 HNRNPH1P31943 449 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ATN1P54259 1190 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 NCLNQ969V3 563 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 GORASP1Q9BQQ3 440 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LSM14BQ9BX40 385 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 CHMP2BQ9UQN3 213 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 PHACTR2O75167 634 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 BFSP1Q12934 665 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 DNAJB7Q7Z6W7 309 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LRRC45Q96CN5 670 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 CNDP2Q96KP4 475 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 SNX6Q9UNH7 406 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 C2orf81A6NN90 581 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SYCE1LA8MT33 242 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 NOP14P78316 857 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 GRAMD1BQ3KR37 738 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 FAM186BQ8IYM0 893 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 CACNA2D3Q8IZS8 1091 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 LPIN2Q92539 896 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 POM121Q96HA1 1249 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 EURLQ9NYK6 297 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 DNAJC6O75061 913 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SEC24DO94855 1032 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SLC4A1P02730 911 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SCRN1Q12765 414 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 MTX1Q13505 466 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 CCHCR1Q8TD31 782 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 C12orf4Q9NQ89 552 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 KMT5AQ9NQR1 393 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 ZNF277Q9NRM2 450 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 TMEM5Q9Y2B1 443 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 STK38LQ9Y2H1 464 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 TTLL13PA6NNM8 815 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 GOLGA8RI6L899 631 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 GYS1P13807 737 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 STAT2P52630 851 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 KRT83P78385 493 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 MRPS15P82914 257 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 MDM1Q8TC05 714 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 CCT6BQ92526 530 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 UTP14AQ9BVJ6 771 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 DNAJC5Q9H3Z4 198 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 LARSQ9P2J5 1176 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 POLG2Q9UHN1 485 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 EDARQ9UNE0 448 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SOS1Q07889 1333 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SGTAO43765 313 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 AHCYL1O43865 530 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 OLFML2BQ68BL8 750 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 JARID2Q92833 1246 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 RUNDC1Q96C34 613 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
CLCN3-204ENST00000504131 SCOCQ9UIL1 159 aa6.88□□□□□ -1.31
CLCN3-204ENST00000504131 GTPBP10A4D1E9 387 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 PALM3A6NDB9 673 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 F8W810 466 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 RAPGEF3O95398 923 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 NFKBIAP25963 317 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ITGA7Q13683 1181 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 RAPGEF1Q13905 1077 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SLC22A8Q8TCC7 542 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 HAUS8Q9BT25 410 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ZNF180Q9UJW8 692 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 PRKAB1Q9Y478 270 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 TBX3O15119 743 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 MTTPP55157 894 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 NCCRP1Q6ZVX7 275 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 IFNL1Q8IU54 200 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 TMC2Q8TDI7 906 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 MPHOSPH9Q99550 1183 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 EFHD1Q9BUP0 239 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 FARSBQ9NSD9 589 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 MRPL39Q9NYK5 338 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SMIM23A6NLE4 172 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 RTCAO00442 366 aaKnown RBP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ABL1P00519 1130 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 UBASH3AP57075 661 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 ARHGEF6Q15052 776 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLCN3-204ENST00000504131 MAP3K11Q16584 847 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 SH3BP5LQ7L8J4 393 aa6.87□□□□□ -1.31
CLCN3-204ENST00000504131 PNMA8AQ86V59 439 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms