RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 GREB1LQ9C091 1923 aaPredicted RBP28.63■■■□□ 2.17
TTC3-224ENST00000494243 SENP6Q9GZR1 1112 aaPredicted RBP28.63■■■□□ 2.17
TTC3-224ENST00000494243 EPB41L4AQ9HCS5 686 aaPredicted RBP28.62■■■□□ 2.17
TTC3-224ENST00000494243 GOPCQ9HD26 462 aa28.62■■■□□ 2.17
TTC3-224ENST00000494243 PCDHB15Q9Y5E8 787 aa28.62■■■□□ 2.17
TTC3-224ENST00000494243 COL11A1P12107 1806 aaPredicted RBP28.62■■■□□ 2.17
TTC3-224ENST00000494243 DNM1LO00429 736 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 VWA5AO00534 786 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 SLC25A27O95847 323 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 FCER1AP12319 257 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 FAM83BQ5T0W9 1011 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 STK11IPQ8N1F8 1099 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 MAML3Q96JK9 1138 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 SLC5A4Q9NY91 659 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 PPP1R9AQ9ULJ8 1098 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 ROBO3Q96MS0 1386 aa28.61■■■□□ 2.17
TTC3-224ENST00000494243 MINDY4BA8MYZ0 360 aa28.6■■■□□ 2.17
TTC3-224ENST00000494243 GPAA1O43292 621 aa28.6■■■□□ 2.17
TTC3-224ENST00000494243 ZFYP08048 801 aaPredicted RBP28.6■■■□□ 2.17
TTC3-224ENST00000494243 PRAMEF19Q5SWL8 479 aa28.6■■■□□ 2.17
TTC3-224ENST00000494243 RIOX2Q8IUF8 465 aa28.6■■■□□ 2.17
TTC3-224ENST00000494243 REPS2Q8NFH8 660 aa28.6■■■□□ 2.17
TTC3-224ENST00000494243 M0R2C6 588 aa28.59■■■□□ 2.17
TTC3-224ENST00000494243 SEPT4O43236 478 aa28.59■■■□□ 2.17
TTC3-224ENST00000494243 MKNK2Q9HBH9 465 aa28.59■■■□□ 2.17
TTC3-224ENST00000494243 NYAP2Q9P242 653 aa28.59■■■□□ 2.17
TTC3-224ENST00000494243 ZNF214Q9UL59 606 aaPredicted RBP28.59■■■□□ 2.17
TTC3-224ENST00000494243 STAT3P40763 770 aa28.58■■■□□ 2.17
TTC3-224ENST00000494243 GJC2Q5T442 439 aaPredicted RBP28.58■■■□□ 2.17
TTC3-224ENST00000494243 ANO1Q5XXA6 986 aa28.58■■■□□ 2.17
TTC3-224ENST00000494243 TDHQ8IZJ6 230 aa28.58■■■□□ 2.17
TTC3-224ENST00000494243 NUP88Q99567 741 aaPredicted RBP28.58■■■□□ 2.17
TTC3-224ENST00000494243 UBE2OQ9C0C9 1292 aaKnown RBP28.58■■■□□ 2.17
TTC3-224ENST00000494243 ZNFX1Q9P2E3 1918 aaKnown RBP28.58■■■□□ 2.17
TTC3-224ENST00000494243 LAMA3Q16787 3333 aa28.58■■■□□ 2.17
TTC3-224ENST00000494243 IGKV6D-41A0A0C4DH26 115 aa28.57■■■□□ 2.16
TTC3-224ENST00000494243 RAD21O60216 631 aa28.57■■■□□ 2.16
TTC3-224ENST00000494243 GNAT2P19087 354 aa28.57■■■□□ 2.16
TTC3-224ENST00000494243 ATN1P54259 1190 aaPredicted RBP28.57■■■□□ 2.16
TTC3-224ENST00000494243 ARRDC4Q8NCT1 418 aa28.57■■■□□ 2.16
TTC3-224ENST00000494243 PI4K2BQ8TCG2 481 aa28.57■■■□□ 2.16
TTC3-224ENST00000494243 OTUD7AQ8TE49 926 aaPredicted RBP28.57■■■□□ 2.16
TTC3-224ENST00000494243 F5H6K3 240 aa28.56■■■□□ 2.16
TTC3-224ENST00000494243 KLRC3Q07444 240 aa28.56■■■□□ 2.16
TTC3-224ENST00000494243 LRIT3Q3SXY7 679 aa28.56■■■□□ 2.16
TTC3-224ENST00000494243 TTC41PQ6P2S7 1318 aa28.56■■■□□ 2.16
TTC3-224ENST00000494243 MMP19Q99542 508 aa28.56■■■□□ 2.16
TTC3-224ENST00000494243 PATL2C9JE40 543 aaKnown RBP28.55■■■□□ 2.16
TTC3-224ENST00000494243 PGK2P07205 417 aa28.55■■■□□ 2.16
TTC3-224ENST00000494243 SEC62Q99442 399 aaKnown RBP28.55■■■□□ 2.16
TTC3-224ENST00000494243 NDUFB10O96000 172 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 TDO2P48775 406 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 MDM2Q00987 491 aaPredicted RBP28.54■■■□□ 2.16
TTC3-224ENST00000494243 ZNF792Q3KQV3 632 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 IFNL3Q8IZI9 196 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 SLF1Q9BQI6 1058 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 CLIP2Q9UDT6 1046 aa28.54■■■□□ 2.16
TTC3-224ENST00000494243 PRDM1O75626 825 aa28.53■■■□□ 2.16
TTC3-224ENST00000494243 APPP05067 770 aa28.53■■■□□ 2.16
TTC3-224ENST00000494243 KCTD2Q14681 263 aa28.53■■■□□ 2.16
TTC3-224ENST00000494243 GPR153Q6NV75 609 aa28.53■■■□□ 2.16
TTC3-224ENST00000494243 DIS3Q9Y2L1 958 aaKnown RBP28.53■■■□□ 2.16
TTC3-224ENST00000494243 RTP1P59025 263 aa28.52■■■□□ 2.16
TTC3-224ENST00000494243 ZNF444Q8N0Y2 327 aaPredicted RBP28.52■■■□□ 2.16
TTC3-224ENST00000494243 MKL1Q969V6 931 aa28.52■■■□□ 2.16
TTC3-224ENST00000494243 TINF2Q9BSI4 451 aa28.52■■■□□ 2.16
TTC3-224ENST00000494243 NRBP1Q9UHY1 535 aa28.52■■■□□ 2.16
TTC3-224ENST00000494243 ERC2O15083 957 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 COPB2P35606 906 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 LRRFIP1Q32MZ4 808 aaKnown RBP28.51■■■□□ 2.15
TTC3-224ENST00000494243 FAM47AQ5JRC9 791 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 SLC39A5Q6ZMH5 540 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 CEP95Q96GE4 821 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 MTMR4Q9NYA4 1195 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 RIPK3Q9Y572 518 aa28.51■■■□□ 2.15
TTC3-224ENST00000494243 DNAH12Q6ZR08 3092 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 KBTBD13C9JR72 458 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 LRRC41Q15345 812 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 ZMYM1Q5SVZ6 1142 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 PRPF38AQ8NAV1 312 aaKnown RBP28.5■■■□□ 2.15
TTC3-224ENST00000494243 TEX13BQ9BXU2 312 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 ZNF287Q9HBT7 754 aa28.5■■■□□ 2.15
TTC3-224ENST00000494243 PLXNA1Q9UIW2 1896 aa28.49■■■□□ 2.15
TTC3-224ENST00000494243 TAL1P17542 331 aaPredicted RBP28.49■■■□□ 2.15
TTC3-224ENST00000494243 ADCYAP1R1P41586 468 aa28.49■■■□□ 2.15
TTC3-224ENST00000494243 SMCHD1A6NHR9 2005 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 SALL3Q9BXA9 1300 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 ATP2A1O14983 1001 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 MYCNP04198 464 aaPredicted RBP28.48■■■□□ 2.15
TTC3-224ENST00000494243 SNX17Q15036 470 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 SNRNP48Q6IEG0 339 aaKnown RBP28.48■■■□□ 2.15
TTC3-224ENST00000494243 FSD1Q9BTV5 496 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 ATP11BQ9Y2G3 1177 aa28.48■■■□□ 2.15
TTC3-224ENST00000494243 MYH4Q9Y623 1939 aa28.47■■■□□ 2.15
TTC3-224ENST00000494243 ZNF865P0CJ78 1059 aaPredicted RBP28.47■■■□□ 2.15
TTC3-224ENST00000494243 MX1P20591 662 aa28.47■■■□□ 2.15
TTC3-224ENST00000494243 NEDD1Q8NHV4 660 aa28.47■■■□□ 2.15
TTC3-224ENST00000494243 NACAP1Q9BZK3 213 aa28.47■■■□□ 2.15
TTC3-224ENST00000494243 SYNPO2Q9UMS6 1093 aa28.47■■■□□ 2.15
TTC3-224ENST00000494243 DNAJC25-GNG10A0A024R161 153 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms