RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 TMEM132BQ14DG7 1078 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 LHX8Q68G74 356 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CCDC129Q6ZRS4 1044 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 IFNL3Q8IZI9 196 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 DPF3Q92784 378 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 IVNS1ABPQ9Y6Y0 642 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 MYH6P13533 1939 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 COL6A3P12111 3177 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 NDUFB10O96000 172 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CYBAP13498 195 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PDE1AP54750 535 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FAM83BQ5T0W9 1011 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 NYAP2Q9P242 653 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PPP1R9AQ9ULJ8 1098 aa13.4□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 COL6A1P12109 1028 aa13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAB11FIP3-210ENST00000487899 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 VWA5AO00534 786 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 COBLO75128 1261 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 APPP05067 770 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 CYP2C19P33261 490 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 PPARAQ07869 468 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 PLS1Q14651 629 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 OLFML2BQ68BL8 750 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 LNPKQ9C0E8 428 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NAPBQ9H115 298 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MROH8Q9H579 483 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 C11orf49Q9H6J7 331 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 TACC3Q9Y6A5 838 aa13.38□□□□□ -0.27
RAB11FIP3-210ENST00000487899 STRNO43815 780 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 EVI5O60447 810 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 AAMPQ13685 434 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 FAM227BQ96M60 508 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NACAP1Q9BZK3 213 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
RAB11FIP3-210ENST00000487899 F5H6K3 240 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 RAD21O60216 631 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 KLRC3Q07444 240 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 EXOC6Q8TAG9 804 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MKL1Q969V6 931 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 NR2E3Q9Y5X4 410 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ZMYM6O95789 1325 aa13.36□□□□□ -0.27
RAB11FIP3-210ENST00000487899 SLC25A27O95847 323 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 TTLL1O95922 423 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 IGHDP01880 384 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 PDE4BQ07343 736 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 DPP9Q86TI2 863 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 GMCL1P1Q8NEA9 526 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ZNF287Q9HBT7 754 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 CLIP2Q9UDT6 1046 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 EYSQ5T1H1 3165 aa13.35□□□□□ -0.27
RAB11FIP3-210ENST00000487899 PGK2P07205 417 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 TSPY3P0CV98 308 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 TSPY8P0CW00 308 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 FCER1AP12319 257 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 CTDSPL2Q05D32 466 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 LRRC26Q2I0M4 334 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 MMP19Q99542 508 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 INCENPQ9NQS7 918 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 HELLSQ9NRZ9 838 aa13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
RAB11FIP3-210ENST00000487899 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms