RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 TMEM132BQ14DG7 1078 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 SNX17Q15036 470 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 LRRC41Q15345 812 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 C9orf50Q5SZB4 431 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 SLC39A5Q6ZMH5 540 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 ABRAQ8N0Z2 381 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 MIER1Q8N108 512 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 FERMT2Q96AC1 680 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 PDLIM7Q9NR12 457 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 SLC5A4Q9NY91 659 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
GCA-208ENST00000479199 USP17L12C9JPN9 530 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 USP17L21D6R901 530 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 PGK2P07205 417 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 FCER1AP12319 257 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 EEF2P13639 858 aaKnown RBP14.46□□□□□ -0.09
GCA-208ENST00000479199 ADCYAP1R1P41586 468 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 C12orf60Q5U649 245 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 C16orf86Q6ZW13 317 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 SH3RF1Q7Z6J0 888 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 RPAP2Q8IXW5 612 aaPredicted RBP14.46□□□□□ -0.09
GCA-208ENST00000479199 MMP19Q99542 508 aa14.46□□□□□ -0.09
GCA-208ENST00000479199 ROBO3Q96MS0 1386 aa14.46□□□□□ -0.1
GCA-208ENST00000479199 ATP5JP18859 108 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 SHHQ15465 462 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 ZNF697Q5TEC3 545 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 FAM109BQ6ICB4 259 aaPredicted RBP14.45□□□□□ -0.1
GCA-208ENST00000479199 AMOTL1Q8IY63 956 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 BADQ92934 168 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 LENG1Q96BZ8 264 aaPredicted RBP14.45□□□□□ -0.1
GCA-208ENST00000479199 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 HAUS7Q99871 368 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.1
GCA-208ENST00000479199 ZBTB40Q9NUA8 1239 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 DDX19BQ9UMR2 479 aa14.45□□□□□ -0.1
GCA-208ENST00000479199 EYSQ5T1H1 3165 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 MYO9BQ13459 2157 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 RAD21O60216 631 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 RAB11FIP3O75154 756 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 TAL1P17542 331 aaPredicted RBP14.44□□□□□ -0.1
GCA-208ENST00000479199 FAM83BQ5T0W9 1011 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 XPNPEP3Q9NQH7 507 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 ZNF214Q9UL59 606 aaPredicted RBP14.44□□□□□ -0.1
GCA-208ENST00000479199 ADAMTS5Q9UNA0 930 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 SLC4A4Q9Y6R1 1079 aa14.44□□□□□ -0.1
GCA-208ENST00000479199 TRIM43BA6NCK2 446 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 VWA5AO00534 786 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 SLC25A27O95847 323 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 PGK1P00558 417 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 MS4A1P11836 297 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 UBE3CQ15386 1083 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 CTR9Q6PD62 1173 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 RIOX2Q8IUF8 465 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.43□□□□□ -0.1
GCA-208ENST00000479199 REPS2Q8NFH8 660 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 TRIM43Q96BQ3 446 aaPredicted RBP14.43□□□□□ -0.1
GCA-208ENST00000479199 DDRGK1Q96HY6 314 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 NUP88Q99567 741 aaPredicted RBP14.43□□□□□ -0.1
GCA-208ENST00000479199 PUS7LQ9H0K6 701 aaKnown RBP14.43□□□□□ -0.1
GCA-208ENST00000479199 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 GOPCQ9HD26 462 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 PPP1R9AQ9ULJ8 1098 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 PHF24Q9UPV7 400 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 GBF1Q92538 1859 aa14.43□□□□□ -0.1
GCA-208ENST00000479199 RARBP10826 455 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 TLE2Q04725 743 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 KCTD2Q14681 263 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 ZNF792Q3KQV3 632 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
GCA-208ENST00000479199 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
GCA-208ENST00000479199 COL25A1Q9BXS0 654 aaPredicted RBP14.42□□□□□ -0.1
GCA-208ENST00000479199 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
GCA-208ENST00000479199 LCTP09848 1927 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 A0A1W2PQ45 241 aaPredicted RBP14.41□□□□□ -0.1
GCA-208ENST00000479199 A0A1W2PQY0 241 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 SMARCA5O60264 1052 aaPredicted RBP14.41□□□□□ -0.1
GCA-208ENST00000479199 ZNF865P0CJ78 1059 aaPredicted RBP14.41□□□□□ -0.1
GCA-208ENST00000479199 ITGB8P26012 769 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 STAT3P40763 770 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 C1orf53Q5VUE5 145 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
GCA-208ENST00000479199 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 PRUNE2Q8WUY3 3088 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 CDH23Q9H251 3354 aa14.41□□□□□ -0.1
GCA-208ENST00000479199 PQBP1O60828 265 aaKnown RBP14.4□□□□□ -0.1
GCA-208ENST00000479199 CLTBP09497 229 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 AKR1A1P14550 325 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 RASA1P20936 1047 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 EPHB4P54760 987 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 RNF180Q86T96 592 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 SLF1Q9BQI6 1058 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 TTYH1Q9H313 450 aaPredicted RBP14.4□□□□□ -0.1
GCA-208ENST00000479199 DIS3Q9Y2L1 958 aaKnown RBP14.4□□□□□ -0.1
GCA-208ENST00000479199 SYNRGQ9UMZ2 1314 aa14.4□□□□□ -0.1
GCA-208ENST00000479199 ADAMTS4O75173 837 aa14.39□□□□□ -0.11
GCA-208ENST00000479199 COPB2P35606 906 aa14.39□□□□□ -0.11
GCA-208ENST00000479199 SNRNP48Q6IEG0 339 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms