RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 BAG3O95817 575 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 GH2P01242 217 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 FCER1AP12319 257 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 JAG1P78504 1218 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 RPUSD2Q8IZ73 545 aaKnown RBP12.63□□□□□ -0.39
CDHR3-209ENST00000472116 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
CDHR3-209ENST00000472116 RPAP3Q9H6T3 665 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-209ENST00000472116 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
CDHR3-209ENST00000472116 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-209ENST00000472116 RFXAPO00287 272 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 CIAO1O76071 339 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 MYOGP15173 224 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 ATP2A2P16615 1042 aaKnown RBP12.62□□□□□ -0.39
CDHR3-209ENST00000472116 CYP2C18P33260 490 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 KCNA10Q16322 511 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 SHROOM1Q2M3G4 852 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-209ENST00000472116 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 CERS4Q9HA82 394 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 CD320Q9NPF0 282 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-209ENST00000472116 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
CDHR3-209ENST00000472116 ARVCFO00192 962 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
CDHR3-209ENST00000472116 COG2Q14746 738 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 MAPKAPK5Q8IW41 473 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 SH3RF3Q8TEJ3 882 aaPredicted RBP12.61□□□□□ -0.39
CDHR3-209ENST00000472116 ARNTL2Q8WYA1 636 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 NSUN4Q96CB9 384 aaKnown RBP12.61□□□□□ -0.39
CDHR3-209ENST00000472116 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 CABP5Q9NP86 173 aa12.61□□□□□ -0.39
CDHR3-209ENST00000472116 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
CDHR3-209ENST00000472116 MYH8P13535 1937 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 MCM3APO60318 1980 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 DCXO43602 365 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 CA3P07451 260 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 ADORA1P30542 326 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 IL15P40933 162 aaPredicted RBP12.6□□□□□ -0.39
CDHR3-209ENST00000472116 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
CDHR3-209ENST00000472116 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 LENG1Q96BZ8 264 aaPredicted RBP12.6□□□□□ -0.39
CDHR3-209ENST00000472116 MFSD14AQ96MC6 490 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 HIPK3Q9H422 1215 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDHR3-209ENST00000472116 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 PALD1Q9ULE6 856 aa12.6□□□□□ -0.39
CDHR3-209ENST00000472116 WDFY4Q6ZS81 3184 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-209ENST00000472116 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-209ENST00000472116 CDK7P50613 346 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 KCTD2Q14681 263 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 KRT40Q6A162 431 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
CDHR3-209ENST00000472116 FAM126BQ8IXS8 530 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 MMP19Q99542 508 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 LRP2BPQ9P2M1 347 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 ZNF536O15090 1300 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 FLT1P17948 1338 aa12.59□□□□□ -0.39
CDHR3-209ENST00000472116 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 SLC25A27O95847 323 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 ASGR1P07306 291 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 GORABQ5T7V8 394 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
CDHR3-209ENST00000472116 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
CDHR3-209ENST00000472116 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
CDHR3-209ENST00000472116 DUSP11O75319 330 aaKnown RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 PFKMP08237 780 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 ZNF865P0CJ78 1059 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 ACTN1P12814 892 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 TAL1P17542 331 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 CST5P28325 142 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 PTPN5P54829 565 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 CCL23P55773 120 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 SPATA5Q8NB90 893 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-209ENST00000472116 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
CDHR3-209ENST00000472116 PTPRZ1P23471 2315 aaPredicted RBP12.56□□□□□ -0.4
CDHR3-209ENST00000472116 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 SCN5AQ14524 2016 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 PGK2P07205 417 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 GRB10Q13322 594 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
CDHR3-209ENST00000472116 PUS10Q3MIT2 529 aaKnown RBP12.56□□□□□ -0.4
CDHR3-209ENST00000472116 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
CDHR3-209ENST00000472116 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 NAA16Q6N069 864 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms