RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MROH8Q9H579 483 aa19.48■□□□□ 0.71
COL9A3-208ENST00000469802 MKNK2Q9HBH9 465 aa19.48■□□□□ 0.71
COL9A3-208ENST00000469802 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
COL9A3-208ENST00000469802 FOXP2O15409 715 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 EVI5O60447 810 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 COL6A1P12109 1028 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 AAMPQ13685 434 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 MFSD14CQ5VZR4 134 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 OLFML2BQ68BL8 750 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 ABRAQ8N0Z2 381 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 REPS2Q8NFH8 660 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 PPP1R9AQ9ULJ8 1098 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 PFASO15067 1338 aa19.47■□□□□ 0.71
COL9A3-208ENST00000469802 CYBAP13498 195 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 STK11IPQ8N1F8 1099 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 C11orf49Q9H6J7 331 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 ZNF287Q9HBT7 754 aa19.46■□□□□ 0.71
COL9A3-208ENST00000469802 ZNF214Q9UL59 606 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-208ENST00000469802 VWA5AO00534 786 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 COBLO75128 1261 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 PRDM1O75626 825 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 APPP05067 770 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 CYP2C19P33261 490 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 PDE1AP54750 535 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 PLS1Q14651 629 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 RIOX2Q8IUF8 465 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 TRPV1Q8NER1 839 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
COL9A3-208ENST00000469802 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
COL9A3-208ENST00000469802 SYNPO2Q9UMS6 1093 aa19.45■□□□□ 0.7
COL9A3-208ENST00000469802 LAMA4Q16363 1823 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 SLC25A27O95847 323 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 NDUFB10O96000 172 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 PPARAQ07869 468 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 NCAPG2Q86XI2 1143 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 MKL1Q969V6 931 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 EVI5LQ96CN4 794 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 CEP95Q96GE4 821 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 NUP88Q99567 741 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-208ENST00000469802 NAPBQ9H115 298 aa19.44■□□□□ 0.7
COL9A3-208ENST00000469802 DDX20Q9UHI6 824 aaKnown RBP19.44■□□□□ 0.7
COL9A3-208ENST00000469802 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 F5H6K3 240 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 MSCO60682 206 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 KLRC3Q07444 240 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 CCDC129Q6ZRS4 1044 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 MTMR4Q9NYA4 1195 aa19.43■□□□□ 0.7
COL9A3-208ENST00000469802 ZBTB47Q9UFB7 747 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-208ENST00000469802 PDE4BQ07343 736 aa19.42■□□□□ 0.7
COL9A3-208ENST00000469802 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-208ENST00000469802 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-208ENST00000469802 GMCL1P1Q8NEA9 526 aa19.42■□□□□ 0.7
COL9A3-208ENST00000469802 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
COL9A3-208ENST00000469802 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
COL9A3-208ENST00000469802 PCDH10Q9P2E7 1040 aa19.42■□□□□ 0.7
COL9A3-208ENST00000469802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL9A3-208ENST00000469802 RAD21O60216 631 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 TTLL1O95922 423 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 FCER1AP12319 257 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 COPB2P35606 906 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 STAT3P40763 770 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 TICAM2Q86XR7 235 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 C7orf61Q8IZ16 206 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 MAML3Q96JK9 1138 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 SLC5A4Q9NY91 659 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 CLIP2Q9UDT6 1046 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 LTBP2Q14767 1821 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 SZT2Q5T011 3432 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 MCM3APO60318 1980 aa19.41■□□□□ 0.7
COL9A3-208ENST00000469802 DNAH12Q6ZR08 3092 aa19.4■□□□□ 0.7
COL9A3-208ENST00000469802 SLC3A2P08195 630 aaKnown RBP19.4■□□□□ 0.7
COL9A3-208ENST00000469802 TSPY3P0CV98 308 aa19.4■□□□□ 0.7
COL9A3-208ENST00000469802 TSPY8P0CW00 308 aa19.4■□□□□ 0.7
COL9A3-208ENST00000469802 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
COL9A3-208ENST00000469802 LRRC47Q8N1G4 583 aaKnown RBP19.4■□□□□ 0.7
COL9A3-208ENST00000469802 TEX13BQ9BXU2 312 aa19.4■□□□□ 0.7
COL9A3-208ENST00000469802 A0A1W2PPC1 479 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 ATP2A1O14983 1001 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 MMP19Q99542 508 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 HELLSQ9NRZ9 838 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.69
COL9A3-208ENST00000469802 A0A0D9SFI3 127 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 DNM1LO00429 736 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 SEPT4O43236 478 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 ZMYM6O95789 1325 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 CNGA1P29973 690 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 TFAP4Q01664 338 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 LRRC26Q2I0M4 334 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 ZNF792Q3KQV3 632 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 FAM47AQ5JRC9 791 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL9A3-208ENST00000469802 PRPF38AQ8NAV1 312 aaKnown RBP19.38■□□□□ 0.69
COL9A3-208ENST00000469802 GDF15Q99988 308 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 DIS3Q9Y2L1 958 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms