RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SLIT1O75093 1534 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 CPDO75976 1380 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 NKRFO15226 690 aaKnown RBP eCLIP8.92□□□□□ -0.98
TPM3-215ENST00000469717 CASP7P55210 303 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 PPP2R5AQ15172 486 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 WDR59Q6PJI9 974 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 OTUD6BQ8N6M0 293 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 SPATA20Q8TB22 786 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 PAGE5Q96GU1 130 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 CABS1Q96KC9 395 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 PDHBP11177 359 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 ERCC5P28715 1186 aaPredicted RBP8.92□□□□□ -0.98
TPM3-215ENST00000469717 DNA2P51530 1060 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 UBXN1Q04323 297 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 CTDSPL2Q05D32 466 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 FILIP1LQ4L180 1135 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 FBXL16Q8N461 479 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
TPM3-215ENST00000469717 GDAQ9Y2T3 454 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 ECM29Q5VYK3 1845 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 SKAP2O75563 359 aaPredicted RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 COPB1P53618 953 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 RRP12Q5JTH9 1297 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 LRP10Q7Z4F1 713 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 AENQ8WTP8 325 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 N4BP2L2Q92802 583 aaPredicted RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 SH3GL2Q99962 352 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 AGPAT5Q9NUQ2 364 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 PSMD14O00487 310 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 PRDM1O75626 825 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 IDEP14735 1019 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 PAX7P23759 505 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 TMEM67Q5HYA8 995 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 RRAGBQ5VZM2 374 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 CEP57Q86XR8 500 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 MARF1Q9Y4F3 1742 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 CCDC189A1A4V9 331 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 SMIM22K7EJ46 135 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 ATP2C2O75185 946 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 MMP1P03956 469 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 KCNQ4P56696 695 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 SF3B2Q13435 895 aaKnown RBP8.91□□□□□ -0.98
TPM3-215ENST00000469717 KIAA1328Q86T90 577 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 LY9Q9HBG7 655 aa8.91□□□□□ -0.98
TPM3-215ENST00000469717 FECHP22830 423 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 IFT88Q13099 833 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 TUBB2AQ13885 445 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 E2F5Q15329 346 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 TRADDQ15628 312 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 DDB1Q16531 1140 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 IGDCC4Q8TDY8 1250 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 TUBB2BQ9BVA1 445 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 CAPN6Q9Y6Q1 641 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 G3V3G9 751 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 NCK2O43639 380 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 FAM153BP0C7A2 387 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 PMS1P54277 932 aaKnown RBP8.9□□□□□ -0.98
TPM3-215ENST00000469717 FAM153CQ494X1 144 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 NBPF14Q5TI25 921 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 TTLL7Q6ZT98 887 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 ZNF526Q8TF50 670 aaPredicted RBP8.9□□□□□ -0.98
TPM3-215ENST00000469717 ZIM3Q96PE6 472 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 MTRQ99707 1265 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 FAM153AQ9UHL3 310 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 FAM184BQ9ULE4 1060 aa8.9□□□□□ -0.98
TPM3-215ENST00000469717 KCNJ18B7U540 433 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 MEFVO15553 781 aaPredicted RBP8.9□□□□□ -0.99
TPM3-215ENST00000469717 ERCC3P19447 782 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 SSRP1Q08945 709 aaKnown RBP8.9□□□□□ -0.99
TPM3-215ENST00000469717 KCNJ12Q14500 433 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 NAA35Q5VZE5 725 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.99
TPM3-215ENST00000469717 NFRKBQ6P4R8 1299 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 POTEDQ86YR6 584 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 ANKRD13CQ8N6S4 541 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 GIMAP7Q8NHV1 300 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.99
TPM3-215ENST00000469717 NUP133Q8WUM0 1156 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 MLXIPQ9HAP2 919 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 ZSWIM5Q9P217 1185 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.9□□□□□ -0.99
TPM3-215ENST00000469717 XDHP47989 1333 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 LTN1O94822 1766 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 MST1RQ04912 1400 aa8.9□□□□□ -0.99
TPM3-215ENST00000469717 CCDC196A0A1B0GTZ2 297 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 OPLAHO14841 1288 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 KIAA0754O94854 1291 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 TTF1Q15361 905 aaPredicted RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 TRIML1Q8N9V2 468 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 SRPRBQ9Y5M8 271 aaKnown RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 MYO5AQ9Y4I1 1855 aaKnown RBP8.89□□□□□ -0.99
TPM3-215ENST00000469717 OVOS2A0A0G2JMS6 1433 aa8.89□□□□□ -0.99
TPM3-215ENST00000469717 EYA2O00167 538 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms