RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 GDAP1L1Q96MZ0 367 aa13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 LIMA1Q9UHB6 759 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-203ENST00000462146 COL4A1P02462 1669 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 KCNJ18B7U540 433 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 KCNJ12Q14500 433 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 NELFBQ8WX92 580 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 TNFRSF25Q93038 417 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 SEMA3EO15041 775 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 EIF3JO75822 258 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 STARD3NLO95772 234 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 WHAMMP3Q1A5X7 153 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 TCP11X2Q5H9J9 407 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 PDXDC2PQ6P474 469 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 LEKR1Q6ZMV7 388 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 CCDC51Q96ER9 411 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 PNPLA7Q6ZV29 1317 aa13.25□□□□□ -0.29
PDZRN3-203ENST00000462146 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 PAK1Q13153 545 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 GSPT2Q8IYD1 628 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 ZMYND10O75800 440 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 ATP1A1P05023 1023 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 CYP7A1P22680 504 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 MCM7P33993 719 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 UBXN1Q04323 297 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 IQUBQ8NA54 791 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 CAPZA3Q96KX2 299 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 MMS19Q96T76 1030 aa13.24□□□□□ -0.29
PDZRN3-203ENST00000462146 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 NDUFA10O95299 355 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PMS1P54277 932 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PIK3AP1Q6ZUJ8 805 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 FAM204AQ9H8W3 233 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 ABCF2Q9UG63 623 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 RWDD2AQ9UIY3 292 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 NMT2O60551 498 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 XBP1P17861 261 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 GNAT2P19087 354 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PRCPP42785 496 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 HERVK_113P62684 666 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 DYNLL1P63167 89 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 IRF2BP1Q8IU81 584 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 EEF2KMTQ96G04 330 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 TSPYL1Q9H0U9 437 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 EPN1Q9Y6I3 576 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 TAF1P21675 1872 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 PES1O00541 588 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 TRAPPC11Q7Z392 1133 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 ESR2Q92731 530 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
PDZRN3-203ENST00000462146 SYF2O95926 243 aaKnown RBP13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 CNTNAP5Q8WYK1 1306 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 TROAPQ12815 778 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 SRBD1Q8N5C6 995 aaKnown RBP13.22□□□□□ -0.29
PDZRN3-203ENST00000462146 RNF40O75150 1001 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 RPN1P04843 607 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 MYBL2P10244 700 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 RCAN1P53805 252 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 SKIDA1Q1XH10 827 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
PDZRN3-203ENST00000462146 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 RCCD1A6NED2 376 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 ZNF185O15231 689 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 KLK7P49862 253 aa13.21□□□□□ -0.3
PDZRN3-203ENST00000462146 USP14P54578 494 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms