RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ENAHQ8N8S7 591 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-213ENST00000457179 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 FAM217BQ9NTX9 383 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-213ENST00000457179 GGA1Q9UJY5 639 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 MAP2K7O14733 419 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 FOXN1O15353 648 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 CDKL5O76039 1030 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 MMP10P09238 476 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 LIG3P49916 1009 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 ATL3Q6DD88 541 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 TOGARAM2Q6ZUX3 1019 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 RABEP2Q9H5N1 569 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 FAM204AQ9H8W3 233 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 ABCB6Q9NP58 842 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
TOP3B-213ENST00000457179 MAP2K2P36507 400 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 GRIN1Q05586 938 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 DIS3L2Q8IYB7 885 aaKnown RBP15.34■□□□□ 0.05
TOP3B-213ENST00000457179 ANKRD20A12PQ8NF67 263 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 OXER1Q8TDS5 423 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 PNKPQ96T60 521 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 GOLGA8HP0CJ92 632 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 BRD3Q15059 726 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 TADA2BQ86TJ2 420 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
TOP3B-213ENST00000457179 XDHP47989 1333 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 MYH3P11055 1940 aa15.34■□□□□ 0.05
TOP3B-213ENST00000457179 FAM205CA6NFA0 338 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 TFAP4Q01664 338 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 ATP2B2Q01814 1243 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 SLC39A14Q15043 492 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 SAFBQ15424 915 aaKnown RBP eCLIP15.33■□□□□ 0.05
TOP3B-213ENST00000457179 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.05
TOP3B-213ENST00000457179 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 STAG1Q8WVM7 1258 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 VAT1LQ9HCJ6 419 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 CABP5Q9NP86 173 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.05
TOP3B-213ENST00000457179 NRAPQ86VF7 1730 aa15.33■□□□□ 0.05
TOP3B-213ENST00000457179 VEGFAP15692 232 aaPredicted RBP15.33■□□□□ 0.04
TOP3B-213ENST00000457179 PLCD1P51178 756 aa15.33■□□□□ 0.04
TOP3B-213ENST00000457179 DNAJC21Q5F1R6 531 aaKnown RBP15.33■□□□□ 0.04
TOP3B-213ENST00000457179 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.04
TOP3B-213ENST00000457179 CD209Q9NNX6 404 aa15.33■□□□□ 0.04
TOP3B-213ENST00000457179 PNPLA7Q6ZV29 1317 aa15.33■□□□□ 0.04
TOP3B-213ENST00000457179 ADKP55263 362 aaKnown RBP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 NCAPHQ15003 741 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 GRAMD1CQ8IYS0 662 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 PCNTO95613 3336 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 SPEF2Q9C093 1822 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 BRD2P25440 801 aaKnown RBP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 RBM5P52756 815 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 NTRK3Q16288 839 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 BAG1Q99933 345 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 DBNDD1Q9H9R9 158 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 CACNB3P54284 484 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 ALX1Q15699 326 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 EFCAB13Q8IY85 973 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP3B-213ENST00000457179 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
TOP3B-213ENST00000457179 ARHGAP6O43182 974 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 ERLIN1O75477 346 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 CMA1P23946 247 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 BTDP43251 543 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
TOP3B-213ENST00000457179 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-213ENST00000457179 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 FBXW10Q5XX13 1052 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 KIFC2Q96AC6 838 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 SUFUQ9UMX1 484 aa15.31■□□□□ 0.04
TOP3B-213ENST00000457179 ERLIN2O94905 339 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 LIFRP42702 1097 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 CASP8Q14790 479 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 CLEC10AQ8IUN9 316 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 TSPY3P0CV98 308 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 TSPY8P0CW00 308 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 NLRP12P59046 1061 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 PDE4BQ07343 736 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 TEX11Q8IYF3 940 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms