RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RBM5P52756 815 aaKnown RBP eCLIP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 PDE1AP54750 535 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 CABP4P57796 275 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 TRIM28Q13263 835 aaKnown RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 PUM3Q15397 648 aaKnown RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 CDCA2Q69YH5 1023 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 FAM180BQ6P0A1 224 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 PLBD2Q8NHP8 589 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 SCLT1Q96NL6 688 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 TRIM6Q9C030 488 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 ITM2BQ9Y287 266 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 SBF2Q86WG5 1849 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 CCDC175P0C221 793 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 CLDN10P78369 228 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 FMR1Q06787 632 aaKnown RBP eCLIP8.96□□□□□ -0.97
BRCC3-208ENST00000453705 PKN2Q16513 984 aaKnown RBP8.96□□□□□ -0.97
BRCC3-208ENST00000453705 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.97
BRCC3-208ENST00000453705 TTC5Q8N0Z6 440 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 KIF1BPQ96EK5 621 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 KIF12Q96FN5 646 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 SMYD2Q9NRG4 433 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 MAP3K2Q9Y2U5 619 aa8.96□□□□□ -0.97
BRCC3-208ENST00000453705 A0A1B0GUL6 1792 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 COL24A1Q17RW2 1714 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 SYNDIG1LA6NDD5 238 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 GRM8O00222 908 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 TREHO43280 583 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 TMEM127O75204 238 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 SKIP12755 728 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 XBP1P17861 261 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 CASP7P55210 303 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 PROSER3Q2NL68 480 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 MEX3CQ5U5Q3 659 aaKnown RBP8.96□□□□□ -0.98
BRCC3-208ENST00000453705 UNC5CLQ8IV45 518 aa8.96□□□□□ -0.98
BRCC3-208ENST00000453705 DDX60Q8IY21 1712 aaKnown RBP8.96□□□□□ -0.98
BRCC3-208ENST00000453705 SPATA31A5Q5VU36 1347 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 SPATA31A7Q8IWB4 1347 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NEURL1BA8MQ27 555 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NR1H3Q13133 447 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NCOA4Q13772 614 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 PTPN14Q15678 1187 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 TSHZ3Q63HK5 1081 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 IQCEQ6IPM2 695 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 CCDC73Q6ZRK6 1079 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NKX2-3Q8TAU0 364 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NGLY1Q96IV0 654 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 IWS1Q96ST2 819 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
BRCC3-208ENST00000453705 FNIP2Q9P278 1114 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 IGKV5-2P06315 115 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 GJA8P48165 433 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 KIAA2012Q0VF49 1180 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 SLMAPQ14BN4 828 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 XRRA1Q6P2D8 792 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 C11orf74Q86VG3 221 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 NEK9Q8TD19 979 aa8.95□□□□□ -0.98
BRCC3-208ENST00000453705 TAF1LQ8IZX4 1826 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 MYH7P12883 1935 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 KCNQ2O43526 872 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 COPAP53621 1224 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 RCAN1P53805 252 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 MLC1Q15049 377 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 MMS22LQ6ZRQ5 1243 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 FAM210AQ96ND0 272 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 PLA2G12BQ9BX93 195 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 TRIM55Q9BYV6 548 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 ATG3Q9NT62 314 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 BCL9LQ86UU0 1499 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 KIF5CO60282 957 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 SLC4A1P02730 911 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
BRCC3-208ENST00000453705 EIF2S2P20042 333 aaKnown RBP8.94□□□□□ -0.98
BRCC3-208ENST00000453705 DDIT3P35638 169 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 MORC3Q14149 939 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 GCKRQ14397 625 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 GALNT17Q6IS24 598 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 EEPD1Q7L9B9 569 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 CELF2-AS1Q8N7Q2 184 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 KAZALD1Q96I82 304 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 SPAG5Q96R06 1193 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 KIF2CQ99661 725 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 COPRSQ9NQ92 184 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 RBM28Q9NW13 759 aaKnown RBP8.94□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF69Q9UC07 566 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 CEP131Q9UPN4 1083 aa8.94□□□□□ -0.98
BRCC3-208ENST00000453705 H7C1W4 665 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 TOR1BO14657 336 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 TPPPO94811 219 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 MX1P20591 662 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF654Q8IZM8 581 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms