RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SLC9C1Q4G0N8 1177 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 RAET1EQ8TD07 263 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 COA7Q96BR5 231 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 PORCNQ9H237 461 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 ANO2Q9NQ90 1003 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
VPS16-205ENST00000453689 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
VPS16-205ENST00000453689 NOVP48745 357 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 FLT3LGP49771 235 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
VPS16-205ENST00000453689 ARMC5Q96C12 935 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 ATG4CQ96DT6 458 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
VPS16-205ENST00000453689 STX8Q9UNK0 236 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
VPS16-205ENST00000453689 REC8O95072 547 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 MAPK4P31152 587 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 MB21D1Q8N884 522 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 SH3TC2Q8TF17 1288 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 TCP11L1Q9NUJ3 509 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 PPP1R9AQ9ULJ8 1098 aa17.28■□□□□ 0.36
VPS16-205ENST00000453689 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
VPS16-205ENST00000453689 GRK4P32298 578 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 CCNA1P78396 465 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 IRF5Q13568 498 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 NBPF11Q86T75 865 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.36
VPS16-205ENST00000453689 ESR2Q92731 530 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 MAP4K1Q92918 833 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 ZNF333Q96JL9 665 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 GJD2Q9UKL4 321 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 ADAMTS5Q9UNA0 930 aa17.27■□□□□ 0.36
VPS16-205ENST00000453689 B4E1Z4 1266 aa17.26■□□□□ 0.35
VPS16-205ENST00000453689 ADCY3O60266 1144 aa17.26■□□□□ 0.35
VPS16-205ENST00000453689 SOX10P56693 466 aa17.26■□□□□ 0.35
VPS16-205ENST00000453689 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
VPS16-205ENST00000453689 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
VPS16-205ENST00000453689 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
VPS16-205ENST00000453689 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
VPS16-205ENST00000453689 VWA5AO00534 786 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
VPS16-205ENST00000453689 KDM4AO75164 1064 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 CYP21A2P08686 494 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 BMP3P12645 472 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 NT5C2P49902 561 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 TMEM132BQ14DG7 1078 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 GMCL1Q96IK5 515 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 TMEM47Q9BQJ4 181 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 MOV10L1Q9BXT6 1211 aaKnown RBP17.25■□□□□ 0.35
VPS16-205ENST00000453689 SPATC1LQ9H0A9 340 aa17.25■□□□□ 0.35
VPS16-205ENST00000453689 TOP1P11387 765 aaKnown RBP17.24■□□□□ 0.35
VPS16-205ENST00000453689 ELNP15502 786 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 MCCP23508 829 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 PLS1Q14651 629 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 PRPF38AQ8NAV1 312 aaKnown RBP17.24■□□□□ 0.35
VPS16-205ENST00000453689 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 PXYLP1Q8TE99 480 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 SOCS4Q8WXH5 440 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 TTC14Q96N46 770 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 KRT23Q9C075 422 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
VPS16-205ENST00000453689 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
VPS16-205ENST00000453689 SLC1A4P43007 532 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 MORN1Q5T089 497 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 SHCBP1Q8NEM2 672 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 USP6NLQ92738 828 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
VPS16-205ENST00000453689 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
VPS16-205ENST00000453689 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 TAF6LQ9Y6J9 622 aa17.23■□□□□ 0.35
VPS16-205ENST00000453689 MCM3APO60318 1980 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
VPS16-205ENST00000453689 ERCC3P19447 782 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 CYP2B6P20813 491 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 PTPREP23469 700 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 STAT2P52630 851 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
VPS16-205ENST00000453689 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
VPS16-205ENST00000453689 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
VPS16-205ENST00000453689 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms