RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 GOPCQ9HD26 462 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 MYH8P13535 1937 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 FOSL2P15408 326 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 TMEM132BQ14DG7 1078 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 SDR42E1Q8WUS8 393 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 CNPY2Q9Y2B0 182 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
LYSMD3-202ENST00000453259 MROH7Q68CQ1 1323 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 RAG1P15918 1043 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 FPGSQ05932 587 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 ZNF792Q3KQV3 632 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 FERMT2Q96AC1 680 aa17.22■□□□□ 0.35
LYSMD3-202ENST00000453259 SYNGAP1Q96PV0 1343 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 A0A1W2PQ45 241 aaPredicted RBP17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 A0A1W2PQY0 241 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 DCDC2CA8MYV0 355 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 GOLIM4O00461 696 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 VWA5AO00534 786 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 HMMRO75330 724 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 MS4A1P11836 297 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 AKR1B1P15121 316 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 STAT3P40763 770 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 SPICE1Q8N0Z3 855 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.35
LYSMD3-202ENST00000453259 VCANP13611 3396 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 RLBP1P12271 317 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 SLC44A5Q8NCS7 719 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 PRDM6Q9NQX0 595 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 TMEM39AQ9NV64 488 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 ZNF214Q9UL59 606 aaPredicted RBP17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
LYSMD3-202ENST00000453259 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ADAMTS4O75173 837 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ZNF865P0CJ78 1059 aaPredicted RBP17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ADD2P35612 726 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 CDK8P49336 464 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ELP1O95163 1332 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
LYSMD3-202ENST00000453259 PLXNA1Q9UIW2 1896 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 ZNFX1Q9P2E3 1918 aaKnown RBP17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 ATP2A1O14983 1001 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 MBD4O95243 580 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 PGK1P00558 417 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 CYP2D6P10635 497 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 EEF2P13639 858 aaKnown RBP17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 ACLYP53396 1101 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 ZSCAN25Q6NSZ9 544 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 FAM184BQ9ULE4 1060 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 SYNPO2Q9UMS6 1093 aa17.18■□□□□ 0.34
LYSMD3-202ENST00000453259 COL11A1P12107 1806 aaPredicted RBP17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 TIMP1P01033 207 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 PGK2P07205 417 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 ATP5JP18859 108 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 DNAJB2P25686 324 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 ITGB8P26012 769 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 EVX2Q03828 476 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 FAAP100Q0VG06 881 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 REPS2Q8NFH8 660 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 GLT1D1Q96MS3 346 aa17.17■□□□□ 0.34
LYSMD3-202ENST00000453259 CDH23Q9H251 3354 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms