RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PAK6Q9NQU5 681 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 BTBD7Q9P203 1132 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 PATL2C9JE40 543 aaKnown RBP10.43□□□□□ -0.74
USP6NL-203ENST00000443016 ZMYND10O75800 440 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
USP6NL-203ENST00000443016 TRIM32Q13049 653 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
USP6NL-203ENST00000443016 WDR70Q9NW82 654 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
USP6NL-203ENST00000443016 CNMDO75829 334 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 SIAH1Q8IUQ4 282 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 IFNL3Q8IZI9 196 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 APBA2Q99767 749 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 NAPBQ9H115 298 aa10.43□□□□□ -0.74
USP6NL-203ENST00000443016 LAMA3Q16787 3333 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 PRDM1O75626 825 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 IGHDP01880 384 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 SLC3A2P08195 630 aaKnown RBP10.42□□□□□ -0.74
USP6NL-203ENST00000443016 CAPN2P17655 700 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 LNPKQ9C0E8 428 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
USP6NL-203ENST00000443016 TRIOBPQ9H2D6 2365 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 MYH8P13535 1937 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 RASA1P20936 1047 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 PDE1AP54750 535 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 PDE4BQ07343 736 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 CCL14Q16627 93 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 MORN1Q5T089 497 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 NCAPG2Q86XI2 1143 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 SMC5Q8IY18 1101 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 EVI5LQ96CN4 794 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
USP6NL-203ENST00000443016 SLC15A5A6NIM6 579 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 PTPREP23469 700 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 DSG3P32926 999 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 ZMYM1Q5SVZ6 1142 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 PAWRQ96IZ0 340 aaKnown RBP10.41□□□□□ -0.74
USP6NL-203ENST00000443016 MOV10L1Q9BXT6 1211 aaKnown RBP10.41□□□□□ -0.74
USP6NL-203ENST00000443016 NR2E3Q9Y5X4 410 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 H0YGN5 161 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 STRNO43815 780 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 ERCC3P19447 782 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 CACNB2Q08289 660 aaPredicted RBP10.41□□□□□ -0.74
USP6NL-203ENST00000443016 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 NECAB2Q7Z6G3 386 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 USP6NLQ92738 828 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 CLIP2Q9UDT6 1046 aa10.41□□□□□ -0.74
USP6NL-203ENST00000443016 CNGA1P29973 690 aa10.4□□□□□ -0.74
USP6NL-203ENST00000443016 FAM83BQ5T0W9 1011 aa10.4□□□□□ -0.74
USP6NL-203ENST00000443016 CRISPLD2Q9H0B8 497 aa10.4□□□□□ -0.74
USP6NL-203ENST00000443016 ISY1Q9ULR0 285 aaKnown RBP10.4□□□□□ -0.74
USP6NL-203ENST00000443016 ROBO3Q96MS0 1386 aa10.4□□□□□ -0.74
USP6NL-203ENST00000443016 SZT2Q5T011 3432 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 EVI5O60447 810 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 ADORA2AP29274 412 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 PPARAQ07869 468 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 GRB14Q14449 540 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 MAP3K21Q5TCX8 1036 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 CCDC129Q6ZRS4 1044 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 UBE2Q1Q7Z7E8 422 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 RILPL2Q969X0 211 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.75
USP6NL-203ENST00000443016 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 MROH8Q9H579 483 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 FBXO28Q9NVF7 368 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 STAP2Q9UGK3 403 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 CTDP1Q9Y5B0 961 aaPredicted RBP10.4□□□□□ -0.75
USP6NL-203ENST00000443016 SALL3Q9BXA9 1300 aa10.4□□□□□ -0.75
USP6NL-203ENST00000443016 F5H6K3 240 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 HOXD11P31277 338 aaPredicted RBP10.39□□□□□ -0.75
USP6NL-203ENST00000443016 KLRC3Q07444 240 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 TTLL1O95922 423 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 HOXC6P09630 235 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 FCER1AP12319 257 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 CCND3P30281 292 aaPredicted RBP10.39□□□□□ -0.75
USP6NL-203ENST00000443016 CYP2C19P33261 490 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 RETREG2Q8NC44 543 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 DIS3LQ8TF46 1054 aaKnown RBP10.39□□□□□ -0.75
USP6NL-203ENST00000443016 CEP95Q96GE4 821 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
USP6NL-203ENST00000443016 PPP1R9AQ9ULJ8 1098 aa10.39□□□□□ -0.75
USP6NL-203ENST00000443016 TSPY2A6NKD2 308 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 VWA5AO00534 786 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 SLC25A27O95847 323 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 STAT3P40763 770 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms