RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 GRB14Q14449 540 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 ZNF280CQ8ND82 737 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 ANKFY1Q9P2R3 1169 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 IVNS1ABPQ9Y6Y0 642 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 ELP1O95163 1332 aa9.34□□□□□ -0.91
SSXP3-201ENST00000442971 PTPN13Q12923 2485 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 KRT38O76015 456 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 CD4P01730 458 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 ERVK-21P61565 698 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 SMAD4Q13485 552 aaKnown RBP9.33□□□□□ -0.92
SSXP3-201ENST00000442971 CBX2Q14781 532 aaPredicted RBP9.33□□□□□ -0.92
SSXP3-201ENST00000442971 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 MRPL38Q96DV4 380 aaKnown RBP9.33□□□□□ -0.92
SSXP3-201ENST00000442971 GLT1D1Q96MS3 346 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 CTNNA3Q9UI47 895 aa9.33□□□□□ -0.92
SSXP3-201ENST00000442971 PRR5-ARHGAP8B1AHC4 643 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 ARVCFO00192 962 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
SSXP3-201ENST00000442971 TAF5LO75529 589 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 SIP14410 1827 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 CCNA1P78396 465 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 ARHGAP8P85298 464 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 ANGPT1Q15389 498 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 TIGD5Q53EQ6 642 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 SOWAHCQ53LP3 525 aaPredicted RBP9.32□□□□□ -0.92
SSXP3-201ENST00000442971 TCEAL5Q5H9L2 206 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 DPP9Q86TI2 863 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
SSXP3-201ENST00000442971 TGS1Q96RS0 853 aaKnown RBP9.32□□□□□ -0.92
SSXP3-201ENST00000442971 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 MRIQ9BWK5 157 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 WNT8AQ9H1J5 351 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 DOCK2Q92608 1830 aa9.32□□□□□ -0.92
SSXP3-201ENST00000442971 ADAMTS4O75173 837 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 PFKMP08237 780 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 ACTN1P12814 892 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 ICAM3P32942 547 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 NFIAQ12857 509 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 KCNA10Q16322 511 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 PTPN21Q16825 1174 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 IFNLR1Q8IU57 520 aaPredicted RBP9.31□□□□□ -0.92
SSXP3-201ENST00000442971 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 SCLYQ96I15 445 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 RSPH6AQ9H0K4 717 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 R4GN57 208 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 IGF2RP11717 2491 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 MYH3P11055 1940 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
SSXP3-201ENST00000442971 NCK2O43639 380 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 SHC2P98077 582 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 DLX2Q07687 328 aaPredicted RBP9.31□□□□□ -0.92
SSXP3-201ENST00000442971 PTPROQ16827 1216 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
SSXP3-201ENST00000442971 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 PANK3Q9H999 370 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
SSXP3-201ENST00000442971 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
SSXP3-201ENST00000442971 HECTD1Q9ULT8 2610 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 LOC400499M0QZD8 3231 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
SSXP3-201ENST00000442971 PMLP29590 882 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 CLCN5P51795 746 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 CTC1Q2NKJ3 1217 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 CCSAPQ6IQ19 270 aaPredicted RBP9.3□□□□□ -0.92
SSXP3-201ENST00000442971 ZGPATQ8N5A5 531 aaKnown RBP9.3□□□□□ -0.92
SSXP3-201ENST00000442971 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
SSXP3-201ENST00000442971 KDF1Q8NAX2 398 aaPredicted RBP9.3□□□□□ -0.92
SSXP3-201ENST00000442971 CCDC191Q8NCU4 936 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 RABGAP1Q9Y3P9 1069 aa9.3□□□□□ -0.92
SSXP3-201ENST00000442971 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 COL11A1P12107 1806 aaPredicted RBP9.29□□□□□ -0.92
SSXP3-201ENST00000442971 ADORA2AP29274 412 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 LMNB2Q03252 620 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 DEFB128Q7Z7B8 93 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 KLHDC9Q8NEP7 349 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 LENG1Q96BZ8 264 aaPredicted RBP9.29□□□□□ -0.92
SSXP3-201ENST00000442971 NSUN3Q9H649 340 aaKnown RBP9.29□□□□□ -0.92
SSXP3-201ENST00000442971 TMOD4Q9NZQ9 345 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 CD207Q9UJ71 328 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 CDK5RAP2Q96SN8 1893 aa9.29□□□□□ -0.92
SSXP3-201ENST00000442971 TENM4Q6N022 2769 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 MYO7AQ13402 2215 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 PTPRSQ13332 1948 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 SYNRGQ9UMZ2 1314 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
SSXP3-201ENST00000442971 LINC01553A4QN01 128 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 SRRM3A6NNA2 597 aaPredicted RBP9.28□□□□□ -0.92
SSXP3-201ENST00000442971 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 CNMDO75829 334 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms