RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ENOX1Q8TC92 643 aaKnown RBP18.86■□□□□ 0.61
PMS1-213ENST00000441310 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.86■□□□□ 0.61
PMS1-213ENST00000441310 THRAP3Q9Y2W1 955 aaKnown RBP18.86■□□□□ 0.61
PMS1-213ENST00000441310 A0A1B0GTH6 734 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 ZEB2O60315 1214 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 MCM3P25205 808 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 ARHGAP25P42331 645 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
PMS1-213ENST00000441310 LRP6O75581 1613 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 KLF18A0A0U1RQI7 1052 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
PMS1-213ENST00000441310 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 FAXDC2Q96IV6 333 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 SLIT2O94813 1529 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 ATP1A2P50993 1020 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 RASGRF1Q13972 1273 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 RESP18Q5W5W9 173 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 LINC00116Q8NCU8 138 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 LPIN2Q92539 896 aa18.85■□□□□ 0.61
PMS1-213ENST00000441310 ZNF213O14771 459 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 MEFVO15553 781 aaPredicted RBP18.84■□□□□ 0.61
PMS1-213ENST00000441310 PDE6AP16499 860 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 ADD2P35612 726 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 ERVK-24P63145 666 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 B4GALNT4Q76KP1 1039 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 SND1Q7KZF4 910 aaKnown RBP eCLIP18.84■□□□□ 0.61
PMS1-213ENST00000441310 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 KIRREL3Q8IZU9 778 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 RNF217Q8TC41 542 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
PMS1-213ENST00000441310 RXRAP19793 462 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 PREPLQ4J6C6 727 aaPredicted RBP18.84■□□□□ 0.61
PMS1-213ENST00000441310 KLC4Q9NSK0 619 aa18.84■□□□□ 0.61
PMS1-213ENST00000441310 PRC1O43663 620 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 FSBPO95073 299 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 CDC25AP30304 524 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 POSTNQ15063 836 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.61
PMS1-213ENST00000441310 AMOTL1Q8IY63 956 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 MAGEB6Q8N7X4 407 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 CAGE1Q8TC20 777 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 BIRC2Q13490 618 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 ERFEQ4G0M1 354 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 VPS37DQ86XT2 251 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 RRP36Q96EU6 259 aaKnown RBP18.83■□□□□ 0.61
PMS1-213ENST00000441310 TFR2Q9UP52 801 aa18.83■□□□□ 0.61
PMS1-213ENST00000441310 AHDC1Q5TGY3 1603 aaPredicted RBP18.83■□□□□ 0.6
PMS1-213ENST00000441310 ATP1A1P05023 1023 aaKnown RBP18.83■□□□□ 0.6
PMS1-213ENST00000441310 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
PMS1-213ENST00000441310 SLC5A1P13866 664 aa18.83■□□□□ 0.6
PMS1-213ENST00000441310 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.6
PMS1-213ENST00000441310 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.6
PMS1-213ENST00000441310 MLKLQ8NB16 471 aa18.83■□□□□ 0.6
PMS1-213ENST00000441310 SPATA5Q8NB90 893 aa18.83■□□□□ 0.6
PMS1-213ENST00000441310 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 NTSR2O95665 410 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 GYPCP04921 128 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 GCFC2P16383 781 aaKnown RBP18.82■□□□□ 0.6
PMS1-213ENST00000441310 MRPS25P82663 173 aaKnown RBP18.82■□□□□ 0.6
PMS1-213ENST00000441310 PTPAQ15257 358 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 CEP85LQ5SZL2 805 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 CCNI2Q6ZMN8 369 aaPredicted RBP18.82■□□□□ 0.6
PMS1-213ENST00000441310 TACO1Q9BSH4 297 aaKnown RBP18.82■□□□□ 0.6
PMS1-213ENST00000441310 SRP68Q9UHB9 627 aaKnown RBP18.82■□□□□ 0.6
PMS1-213ENST00000441310 DACH1Q9UI36 760 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 TRAPPC11Q7Z392 1133 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 SERTAD1Q9UHV2 236 aa18.82■□□□□ 0.6
PMS1-213ENST00000441310 PPP6R2O75170 966 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 MIGA1Q8NAN2 632 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 AIDAQ96BJ3 306 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 ARL8AQ96BM9 186 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.81■□□□□ 0.6
PMS1-213ENST00000441310 PHLPP1O60346 1717 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 COBLO75128 1261 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
PMS1-213ENST00000441310 KCTD16Q68DU8 428 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 CNGA4Q8IV77 575 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 POLR2DO15514 142 aaKnown RBP18.81■□□□□ 0.6
PMS1-213ENST00000441310 FGFR2P21802 821 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 CHRNDQ07001 517 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 TEX11Q8IYF3 940 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 CEP120Q8N960 986 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 ABCF2Q9UG63 623 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 SAR1BQ9Y6B6 198 aa18.81■□□□□ 0.6
PMS1-213ENST00000441310 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 MDM2Q00987 491 aaPredicted RBP18.8■□□□□ 0.6
PMS1-213ENST00000441310 CCDC40Q4G0X9 1142 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 SH3GL2Q99962 352 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 PRKAB2O43741 272 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 MBD4O95243 580 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 CLNS1AP54105 237 aaKnown RBP18.8■□□□□ 0.6
PMS1-213ENST00000441310 ANTXR2P58335 489 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 TMTC1Q8IUR5 882 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 TBC1D10CQ8IV04 446 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 NUP88Q99567 741 aaPredicted RBP18.8■□□□□ 0.6
PMS1-213ENST00000441310 ALG1Q9BT22 464 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 MYO1AQ9UBC5 1043 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms