RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CYP2D6P10635 497 aa17.4■□□□□ 0.38
APP-208ENST00000439274 DDB1Q16531 1140 aa17.4■□□□□ 0.38
APP-208ENST00000439274 SLC35F6Q8N357 371 aa17.4■□□□□ 0.38
APP-208ENST00000439274 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
APP-208ENST00000439274 CCDC66A2RUB6 948 aa17.4■□□□□ 0.38
APP-208ENST00000439274 SEMA3EO15041 775 aa17.4■□□□□ 0.38
APP-208ENST00000439274 ATP8B1O43520 1251 aa17.4■□□□□ 0.38
APP-208ENST00000439274 DDAH1O94760 285 aa17.4■□□□□ 0.38
APP-208ENST00000439274 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
APP-208ENST00000439274 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
APP-208ENST00000439274 CNGA4Q8IV77 575 aa17.4■□□□□ 0.38
APP-208ENST00000439274 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
APP-208ENST00000439274 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
APP-208ENST00000439274 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
APP-208ENST00000439274 CALM1P0DP23 149 aa17.39■□□□□ 0.37
APP-208ENST00000439274 CALM2P0DP24 149 aa17.39■□□□□ 0.37
APP-208ENST00000439274 CALM3P0DP25 149 aa17.39■□□□□ 0.37
APP-208ENST00000439274 SIK1P57059 783 aa17.39■□□□□ 0.37
APP-208ENST00000439274 LONRF2Q1L5Z9 754 aa17.39■□□□□ 0.37
APP-208ENST00000439274 KIF4BQ2VIQ3 1234 aa17.39■□□□□ 0.37
APP-208ENST00000439274 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
APP-208ENST00000439274 NEK11Q8NG66 645 aa17.39■□□□□ 0.37
APP-208ENST00000439274 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
APP-208ENST00000439274 ANKZF1Q9H8Y5 726 aa17.39■□□□□ 0.37
APP-208ENST00000439274 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
APP-208ENST00000439274 MYH8P13535 1937 aa17.39■□□□□ 0.37
APP-208ENST00000439274 FGRP09769 529 aa17.39■□□□□ 0.37
APP-208ENST00000439274 SCG2P13521 617 aa17.39■□□□□ 0.37
APP-208ENST00000439274 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.37
APP-208ENST00000439274 GYS2P54840 703 aa17.39■□□□□ 0.37
APP-208ENST00000439274 TAF3Q5VWG9 929 aa17.39■□□□□ 0.37
APP-208ENST00000439274 NELFBQ8WX92 580 aa17.39■□□□□ 0.37
APP-208ENST00000439274 ABHD10Q9NUJ1 306 aa17.39■□□□□ 0.37
APP-208ENST00000439274 LIMA1Q9UHB6 759 aaKnown RBP17.39■□□□□ 0.37
APP-208ENST00000439274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
APP-208ENST00000439274 PAK1Q13153 545 aa17.38■□□□□ 0.37
APP-208ENST00000439274 CAVIN4Q5BKX8 364 aa17.38■□□□□ 0.37
APP-208ENST00000439274 PNKPQ96T60 521 aa17.38■□□□□ 0.37
APP-208ENST00000439274 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
APP-208ENST00000439274 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
APP-208ENST00000439274 ITIH6Q6UXX5 1313 aa17.38■□□□□ 0.37
APP-208ENST00000439274 FAM193AP78312 1265 aa17.38■□□□□ 0.37
APP-208ENST00000439274 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
APP-208ENST00000439274 RWDD2AQ9UIY3 292 aa17.38■□□□□ 0.37
APP-208ENST00000439274 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
APP-208ENST00000439274 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
APP-208ENST00000439274 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
APP-208ENST00000439274 GTPBP6O43824 516 aaPredicted RBP17.37■□□□□ 0.37
APP-208ENST00000439274 MECOMQ03112 1051 aa17.37■□□□□ 0.37
APP-208ENST00000439274 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
APP-208ENST00000439274 TCP11X2Q5H9J9 407 aa17.37■□□□□ 0.37
APP-208ENST00000439274 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.37
APP-208ENST00000439274 SLF1Q9BQI6 1058 aa17.37■□□□□ 0.37
APP-208ENST00000439274 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
APP-208ENST00000439274 CTAGE9A4FU28 777 aa17.37■□□□□ 0.37
APP-208ENST00000439274 TRIM49BA6NDI0 452 aa17.37■□□□□ 0.37
APP-208ENST00000439274 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
APP-208ENST00000439274 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
APP-208ENST00000439274 NSUN4Q96CB9 384 aaKnown RBP17.37■□□□□ 0.37
APP-208ENST00000439274 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
APP-208ENST00000439274 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
APP-208ENST00000439274 CCDC151A5D8V7 595 aa17.36■□□□□ 0.37
APP-208ENST00000439274 H3BQF6 201 aa17.36■□□□□ 0.37
APP-208ENST00000439274 RPN1P04843 607 aaKnown RBP17.36■□□□□ 0.37
APP-208ENST00000439274 FECHP22830 423 aa17.36■□□□□ 0.37
APP-208ENST00000439274 ARHGAP25P42331 645 aa17.36■□□□□ 0.37
APP-208ENST00000439274 PRCPP42785 496 aa17.36■□□□□ 0.37
APP-208ENST00000439274 PFKFB3Q16875 520 aaPredicted RBP17.36■□□□□ 0.37
APP-208ENST00000439274 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
APP-208ENST00000439274 SMIM5Q71RC9 77 aa17.36■□□□□ 0.37
APP-208ENST00000439274 CCDC51Q96ER9 411 aa17.36■□□□□ 0.37
APP-208ENST00000439274 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
APP-208ENST00000439274 LRRC10BA6NIK2 292 aa17.36■□□□□ 0.37
APP-208ENST00000439274 RHOXF2BP0C7M4 288 aa17.36■□□□□ 0.37
APP-208ENST00000439274 VPS72Q15906 364 aa17.36■□□□□ 0.37
APP-208ENST00000439274 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
APP-208ENST00000439274 ZNF658Q5TYW1 1059 aaPredicted RBP17.36■□□□□ 0.37
APP-208ENST00000439274 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
APP-208ENST00000439274 TMTC1Q8IUR5 882 aa17.36■□□□□ 0.37
APP-208ENST00000439274 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
APP-208ENST00000439274 CEP112Q8N8E3 955 aa17.36■□□□□ 0.37
APP-208ENST00000439274 CHP1Q99653 195 aa17.36■□□□□ 0.37
APP-208ENST00000439274 RHOXF2Q9BQY4 288 aa17.36■□□□□ 0.37
APP-208ENST00000439274 SUGCTQ9HAC7 445 aa17.36■□□□□ 0.37
APP-208ENST00000439274 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
APP-208ENST00000439274 TTF2Q9UNY4 1162 aaKnown RBP17.36■□□□□ 0.37
APP-208ENST00000439274 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
APP-208ENST00000439274 PP2D1A8MPX8 630 aa17.35■□□□□ 0.37
APP-208ENST00000439274 KRT9P35527 623 aa17.35■□□□□ 0.37
APP-208ENST00000439274 HNRNPH2P55795 449 aaKnown RBP17.35■□□□□ 0.37
APP-208ENST00000439274 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
APP-208ENST00000439274 TRIM10Q9UDY6 481 aa17.35■□□□□ 0.37
APP-208ENST00000439274 DLEC1Q9Y238 1755 aa17.35■□□□□ 0.37
APP-208ENST00000439274 PRDX5P30044 214 aa17.35■□□□□ 0.37
APP-208ENST00000439274 UBXN1Q04323 297 aa17.35■□□□□ 0.37
APP-208ENST00000439274 BRD3Q15059 726 aa17.35■□□□□ 0.37
APP-208ENST00000439274 C4orf32Q8N8J7 132 aa17.35■□□□□ 0.37
APP-208ENST00000439274 PLIN2Q99541 437 aa17.35■□□□□ 0.37
APP-208ENST00000439274 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
APP-208ENST00000439274 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms