RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	AOC3	Q16853	763 aa		12.1	□□□□□ -0.47
ARID1A-204	ENST00000430799	CACNA2D3	Q8IZS8	1091 aa		12.1	□□□□□ -0.47
ARID1A-204	ENST00000430799	BIN2	Q9UBW5	565 aa	Predicted RBP	12.1	□□□□□ -0.47
ARID1A-204	ENST00000430799	LAD1	O00515	517 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	LONP1	P36776	959 aa	Known RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	GPATCH11	Q8N954	259 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	RGS12	O14924	1447 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	TCP1	P17987	556 aa	Known RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	HHAT	Q5VTY9	493 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	FBXO18	Q8NFZ0	1043 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	RASSF4	Q9H2L5	321 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	PCDHA12	Q9UN75	941 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	PDE8B	O95263	885 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	HSPA1L	P34931	641 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	USH1G	Q495M9	461 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	FAM47A	Q5JRC9	791 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	ZBTB8OS	Q8IWT0	167 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	CNKSR1	Q969H4	720 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	ZFP91	Q96JP5	570 aa	Predicted RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	TMEM63C	Q9P1W3	806 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	KLRF2	D3W0D1	207 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	HOXA7	P31268	230 aa	Predicted RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	KRBA2	Q6ZNG9	492 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	GPBP1	Q86WP2	473 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	MAP4K1	Q92918	833 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	NDUFB9	Q9Y6M9	179 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	CTTNBP2	Q8WZ74	1663 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	MAP3K15	Q6ZN16	1313 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	KCNJ18	B7U540	433 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	CRCP	O75575	148 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	GSPT1	P15170	499 aa	Known RBP	12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	ATP11A	P98196	1134 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.09	□□□□□ -0.47	3e-11	■■□□□ 13.1
ARID1A-204	ENST00000430799	KCNJ12	Q14500	433 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	GEN1	Q17RS7	908 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	TTC16	Q8NEE8	873 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	MED23	Q9ULK4	1368 aa		12.09	□□□□□ -0.47
ARID1A-204	ENST00000430799	TNNI1	P19237	187 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	TPH2	Q8IWU9	490 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	CABS1	Q96KC9	395 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	GINS2	Q9Y248	185 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	POLR2M	P0CAP2	368 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	BAG6	P46379	1132 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	GBP6	Q6ZN66	633 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	VSIG1	Q86XK7	387 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	C2CD5	Q86YS7	1000 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	NLGN1	Q8N2Q7	840 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	SLC17A8	Q8NDX2	589 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	GLG1	Q92896	1179 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	HYOU1	Q9Y4L1	999 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	SOS2	Q07890	1332 aa	Predicted RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	CCDC160	A6NGH7	325 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	DDX39A	O00148	427 aa	Known RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	GPATCH4	Q5T3I0	446 aa	Known RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	CARD10	Q9BWT7	1032 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	DISP1	Q96F81	1524 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	hCG_1984214	I3L0E3	225 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	PRPF6	O94906	941 aa	Known RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	FGA	P02671	866 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	IL6ST	P40189	918 aa	Predicted RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	TCP10	Q12799	353 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	SPATA1	Q5VX52	437 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	KLHL7	Q8IXQ5	586 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	TRMT44	Q8IYL2	757 aa	Known RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	ZNF713	Q8N859	430 aa	Predicted RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	ATG3	Q9NT62	314 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	CSAD	Q9Y600	493 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	PSD	A5PKW4	1024 aa	Predicted RBP	12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799		I3L4J1	428 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	ATP2A3	Q93084	1043 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	GSDMA	Q96QA5	445 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	BLZF1	Q9H2G9	400 aa		12.08	□□□□□ -0.48
ARID1A-204	ENST00000430799	PNOC	Q13519	176 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	ELF2	Q15723	593 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	FAM26F	Q5R3K3	315 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	SPC25	Q9HBM1	224 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	NLRC4	Q9NPP4	1024 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	USP21	Q9UK80	565 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	MYOM2	P54296	1465 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	GRK7	Q8WTQ7	553 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	RNF26	Q9BY78	433 aa	Predicted RBP	12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	TRIM31	Q9BZY9	425 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	ETF1	P62495	437 aa	Known RBP	12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	SARNP	P82979	210 aa	Known RBP	12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	PTH1R	Q03431	593 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	TYW1B	Q6NUM6	668 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	CCDC62	Q6P9F0	684 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	TBC1D7	Q9P0N9	293 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799		A0A1B0GUA9	196 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	INPP5B	P32019	993 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	GBP1	P32455	592 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	ADD1	P35611	737 aa	Known RBP	12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	MORC3	Q14149	939 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	MAP7	Q14244	749 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	FBXO11	Q86XK2	927 aa		12.07	□□□□□ -0.48
ARID1A-204	ENST00000430799	VCX3B	Q9H321	246 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms