RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 PTPREP23469 700 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 TCP10Q12799 353 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 CERKLQ49MI3 558 aaPredicted RBP21.79■■□□□ 1.08
HDAC10-204ENST00000429374 TRIM34Q9BYJ4 488 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 SYNPO2Q9UMS6 1093 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 PCDHA4Q9UN74 947 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 HPSEQ9Y251 543 aa21.79■■□□□ 1.08
HDAC10-204ENST00000429374 TRIM75PA6NK02 468 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 TNIP1Q15025 636 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 R3HDM1Q15032 1099 aaKnown RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 SLC35G1Q2M3R5 365 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 GPATCH4Q5T3I0 446 aaKnown RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 RESP18Q5W5W9 173 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 ZSCAN29Q8IWY8 852 aaPredicted RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 ELOA2Q8IYF1 753 aaPredicted RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 BLIDQ8IZY5 108 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 FAM151AQ8WW52 585 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 JDP2Q8WYK2 163 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 RRP36Q96EU6 259 aaKnown RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 CLIP2Q9UDT6 1046 aa21.78■■□□□ 1.08
HDAC10-204ENST00000429374 BAZ2BQ9UIF8 2168 aaKnown RBP21.78■■□□□ 1.08
HDAC10-204ENST00000429374 CACNB3P54284 484 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 CXCL9Q07325 125 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 CAMK4Q16566 473 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 SPDYE2Q495Y8 402 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 TMEM179Q6ZVK1 233 aa21.77■■□□□ 1.08
HDAC10-204ENST00000429374 SRPRBQ9Y5M8 271 aaKnown RBP21.77■■□□□ 1.08
HDAC10-204ENST00000429374 A0A1B0GVL5 298 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 MARCKSP29966 332 aaPredicted RBP21.77■■□□□ 1.07
HDAC10-204ENST00000429374 NDUFA8P51970 172 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 TYRO3Q06418 890 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 USP17L2Q6R6M4 530 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 SASS6Q6UVJ0 657 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 FAM83AQ86UY5 434 aa21.77■■□□□ 1.07
HDAC10-204ENST00000429374 ZBED3Q96IU2 234 aaPredicted RBP21.77■■□□□ 1.07
HDAC10-204ENST00000429374 ZNF70Q9UC06 446 aaPredicted RBP21.77■■□□□ 1.07
HDAC10-204ENST00000429374 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 USP17L5A8MUK1 530 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 M0R2N6 131 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 STXBP3O00186 592 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 RPS12P25398 132 aaKnown RBP21.76■■□□□ 1.07
HDAC10-204ENST00000429374 UPF1Q92900 1129 aaKnown RBP eCLIP21.76■■□□□ 1.07
HDAC10-204ENST00000429374 ZMYND12Q9H0C1 365 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
HDAC10-204ENST00000429374 PCDHB6Q9Y5E3 794 aa21.76■■□□□ 1.07
HDAC10-204ENST00000429374 ESYT2A0FGR8 921 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 ZNF202O95125 648 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 PFKFB1P16118 471 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 ZNF543Q08ER8 600 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 WWC2Q6AWC2 1192 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 SHC4Q6S5L8 630 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 FERMT2Q96AC1 680 aa21.75■■□□□ 1.07
HDAC10-204ENST00000429374 FBXO2Q9UK22 296 aaPredicted RBP21.75■■□□□ 1.07
HDAC10-204ENST00000429374 NFKBIEO00221 500 aa21.74■■□□□ 1.07
HDAC10-204ENST00000429374 MPHOSPH10O00566 681 aaKnown RBP21.74■■□□□ 1.07
HDAC10-204ENST00000429374 TBC1D12O60347 775 aa21.74■■□□□ 1.07
HDAC10-204ENST00000429374 GOLGA8HP0CJ92 632 aa21.74■■□□□ 1.07
HDAC10-204ENST00000429374 VEGFAP15692 232 aaPredicted RBP21.74■■□□□ 1.07
HDAC10-204ENST00000429374 PDLIM2Q96JY6 352 aa21.74■■□□□ 1.07
HDAC10-204ENST00000429374 MYO1BO43795 1136 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 GNA11P29992 359 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 PTGER2P43116 358 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 CKAP2LQ8IYA6 745 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 FAM200AQ8TCP9 573 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 DCAF4Q8WV16 495 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 SYKP43405 635 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 ABCB5Q2M3G0 1257 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 EARS2Q5JPH6 523 aaKnown RBP21.73■■□□□ 1.07
HDAC10-204ENST00000429374 TTC38Q5R3I4 469 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 CSRNP1Q96S65 589 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 SDF4Q9BRK5 362 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 FAM13BQ9NYF5 915 aa21.73■■□□□ 1.07
HDAC10-204ENST00000429374 PPP1R18Q6NYC8 613 aa21.72■■□□□ 1.07
HDAC10-204ENST00000429374 HEATR3Q7Z4Q2 680 aa21.72■■□□□ 1.07
HDAC10-204ENST00000429374 LRRC47Q8N1G4 583 aaKnown RBP21.72■■□□□ 1.07
HDAC10-204ENST00000429374 RNF214Q8ND24 703 aa21.72■■□□□ 1.07
HDAC10-204ENST00000429374 GPKOWQ92917 476 aaPredicted RBP eCLIP21.72■■□□□ 1.07
HDAC10-204ENST00000429374 C6orf50Q9HD87 102 aa21.72■■□□□ 1.07
HDAC10-204ENST00000429374 ZBTB12Q9Y330 459 aaPredicted RBP21.72■■□□□ 1.07
HDAC10-204ENST00000429374 ZNF280AP59817 542 aaPredicted RBP21.71■■□□□ 1.07
HDAC10-204ENST00000429374 RBM26Q5T8P6 1007 aaKnown RBP21.71■■□□□ 1.07
HDAC10-204ENST00000429374 TYW1BQ6NUM6 668 aa21.71■■□□□ 1.07
HDAC10-204ENST00000429374 GMCL1P1Q8NEA9 526 aa21.71■■□□□ 1.07
HDAC10-204ENST00000429374 MTMR8Q96EF0 704 aa21.71■■□□□ 1.07
HDAC10-204ENST00000429374 MTMR7Q9Y216 660 aa21.71■■□□□ 1.07
HDAC10-204ENST00000429374 CNTNAP1P78357 1384 aa21.7■■□□□ 1.06
HDAC10-204ENST00000429374 EEF2P13639 858 aaKnown RBP21.7■■□□□ 1.06
HDAC10-204ENST00000429374 ATP2C1P98194 919 aaPredicted RBP21.7■■□□□ 1.06
HDAC10-204ENST00000429374 MAP3K10Q02779 954 aa21.7■■□□□ 1.06
HDAC10-204ENST00000429374 ARL6IP4Q66PJ3 421 aaKnown RBP21.7■■□□□ 1.06
HDAC10-204ENST00000429374 PIBF1Q8WXW3 757 aa21.7■■□□□ 1.06
HDAC10-204ENST00000429374 DPF2Q92785 391 aa21.7■■□□□ 1.06
HDAC10-204ENST00000429374 KIAA1468Q9P260 1216 aa21.7■■□□□ 1.06
HDAC10-204ENST00000429374 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
HDAC10-204ENST00000429374 NAPAP54920 295 aa21.69■■□□□ 1.06
HDAC10-204ENST00000429374 STX1AQ16623 288 aa21.69■■□□□ 1.06
HDAC10-204ENST00000429374 PIK3AP1Q6ZUJ8 805 aa21.69■■□□□ 1.06
HDAC10-204ENST00000429374 KRT25Q7Z3Z0 450 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms