RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 COBLO75128 1261 aa21.24■□□□□ 0.99
GPC1-203ENST00000425056 TMEM132BQ14DG7 1078 aa21.24■□□□□ 0.99
GPC1-203ENST00000425056 NCAPG2Q86XI2 1143 aa21.24■□□□□ 0.99
GPC1-203ENST00000425056 SLC5A4Q9NY91 659 aa21.24■□□□□ 0.99
GPC1-203ENST00000425056 PCDHB15Q9Y5E8 787 aa21.24■□□□□ 0.99
GPC1-203ENST00000425056 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 SLC25A27O95847 323 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 SYN1P17600 705 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 GNAT2P19087 354 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 CNGA1P29973 690 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 LRRC26Q2I0M4 334 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 FBXO28Q9NVF7 368 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
GPC1-203ENST00000425056 PLXNA1Q9UIW2 1896 aa21.22■□□□□ 0.99
GPC1-203ENST00000425056 MAGEA10P43363 369 aaPredicted RBP21.22■□□□□ 0.99
GPC1-203ENST00000425056 SAMD1Q6SPF0 538 aaPredicted RBP21.22■□□□□ 0.99
GPC1-203ENST00000425056 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
GPC1-203ENST00000425056 MINDY4BA8MYZ0 360 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 M0R2C6 588 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 DNM1LO00429 736 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 VWA5AO00534 786 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 SOX1O00570 391 aaPredicted RBP21.21■□□□□ 0.99
GPC1-203ENST00000425056 ERC2O15083 957 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 FCER1AP12319 257 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 LRRFIP1Q32MZ4 808 aaKnown RBP21.21■□□□□ 0.99
GPC1-203ENST00000425056 FAM83BQ5T0W9 1011 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 RIOX2Q8IUF8 465 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 REPS2Q8NFH8 660 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 MAML3Q96JK9 1138 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 MKNK2Q9HBH9 465 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
GPC1-203ENST00000425056 ZNF214Q9UL59 606 aaPredicted RBP21.21■□□□□ 0.99
GPC1-203ENST00000425056 TDO2P48775 406 aa21.2■□□□□ 0.98
GPC1-203ENST00000425056 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 SEPT4O43236 478 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 RAD21O60216 631 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 COPB2P35606 906 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 STK11IPQ8N1F8 1099 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 OTUD7AQ8TE49 926 aaPredicted RBP21.19■□□□□ 0.98
GPC1-203ENST00000425056 SENP6Q9GZR1 1112 aaPredicted RBP21.19■□□□□ 0.98
GPC1-203ENST00000425056 PLIN4Q96Q06 1357 aa21.19■□□□□ 0.98
GPC1-203ENST00000425056 STAT3P40763 770 aa21.18■□□□□ 0.98
GPC1-203ENST00000425056 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
GPC1-203ENST00000425056 MMP19Q99542 508 aa21.18■□□□□ 0.98
GPC1-203ENST00000425056 ZNF287Q9HBT7 754 aa21.18■□□□□ 0.98
GPC1-203ENST00000425056 PATL2C9JE40 543 aaKnown RBP21.17■□□□□ 0.98
GPC1-203ENST00000425056 F5H6K3 240 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 NDUFB10O96000 172 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 APPP05067 770 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 KLRC3Q07444 240 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 IFNL3Q8IZI9 196 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 ARRDC4Q8NCT1 418 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 LRCH3Q96II8 777 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 NUP88Q99567 741 aaPredicted RBP21.17■□□□□ 0.98
GPC1-203ENST00000425056 SLF1Q9BQI6 1058 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 FSD1Q9BTV5 496 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 NRBP1Q9UHY1 535 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 SYNPO2Q9UMS6 1093 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 SALL3Q9BXA9 1300 aa21.17■□□□□ 0.98
GPC1-203ENST00000425056 LTBP2Q14767 1821 aa21.16■□□□□ 0.98
GPC1-203ENST00000425056 MX1P20591 662 aa21.16■□□□□ 0.98
GPC1-203ENST00000425056 KCTD2Q14681 263 aa21.16■□□□□ 0.98
GPC1-203ENST00000425056 ZMYM1Q5SVZ6 1142 aa21.16■□□□□ 0.98
GPC1-203ENST00000425056 TDHQ8IZJ6 230 aa21.16■□□□□ 0.98
GPC1-203ENST00000425056 SEC62Q99442 399 aaKnown RBP21.16■□□□□ 0.98
GPC1-203ENST00000425056 DIS3Q9Y2L1 958 aaKnown RBP21.16■□□□□ 0.98
GPC1-203ENST00000425056 PRDM1O75626 825 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 ZNF792Q3KQV3 632 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 LRIT3Q3SXY7 679 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 GJC2Q5T442 439 aaPredicted RBP21.15■□□□□ 0.98
GPC1-203ENST00000425056 ANO1Q5XXA6 986 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
GPC1-203ENST00000425056 CEP95Q96GE4 821 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 TEX13BQ9BXU2 312 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 NACAP1Q9BZK3 213 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 UBE2OQ9C0C9 1292 aaKnown RBP21.15■□□□□ 0.98
GPC1-203ENST00000425056 MTMR4Q9NYA4 1195 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 CLIP2Q9UDT6 1046 aa21.15■□□□□ 0.98
GPC1-203ENST00000425056 SMCHD1A6NHR9 2005 aa21.14■□□□□ 0.98
GPC1-203ENST00000425056 KBTBD13C9JR72 458 aa21.14■□□□□ 0.97
GPC1-203ENST00000425056 PGK2P07205 417 aa21.14■□□□□ 0.97
GPC1-203ENST00000425056 ATN1P54259 1190 aaPredicted RBP21.14■□□□□ 0.97
GPC1-203ENST00000425056 GPR153Q6NV75 609 aa21.14■□□□□ 0.97
GPC1-203ENST00000425056 PRPF38AQ8NAV1 312 aaKnown RBP21.14■□□□□ 0.97
GPC1-203ENST00000425056 MKL1Q969V6 931 aa21.14■□□□□ 0.97
GPC1-203ENST00000425056 ATP2A1O14983 1001 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 TTLL1O95922 423 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 RTP1P59025 263 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 FAM47AQ5JRC9 791 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 SNRNP48Q6IEG0 339 aaKnown RBP21.13■□□□□ 0.97
GPC1-203ENST00000425056 GMCL1P1Q8NEA9 526 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 TINF2Q9BSI4 451 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 NAPBQ9H115 298 aa21.13■□□□□ 0.97
GPC1-203ENST00000425056 PDE4BQ07343 736 aa21.12■□□□□ 0.97
GPC1-203ENST00000425056 PPARAQ07869 468 aa21.12■□□□□ 0.97
GPC1-203ENST00000425056 LRRC41Q15345 812 aa21.12■□□□□ 0.97
GPC1-203ENST00000425056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.12■□□□□ 0.97
GPC1-203ENST00000425056 NEDD1Q8NHV4 660 aa21.12■□□□□ 0.97
GPC1-203ENST00000425056 COL6A3P12111 3177 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms