RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 TTLL11Q8NHH1 800 aa18.75■□□□□ 0.59
NPC1L1-203ENST00000423141 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
NPC1L1-203ENST00000423141 GREM2Q9H772 168 aa18.75■□□□□ 0.59
NPC1L1-203ENST00000423141 RWDD2AQ9UIY3 292 aa18.75■□□□□ 0.59
NPC1L1-203ENST00000423141 DUSP10Q9Y6W6 482 aa18.75■□□□□ 0.59
NPC1L1-203ENST00000423141 TRIM49BA6NDI0 452 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 TRIM14Q14142 442 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 MAGEB6Q8N7X4 407 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 FAM169AQ9Y6X4 670 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 GOLGA6BA6NDN3 693 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 ERLIN2O94905 339 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 MCM3P25205 808 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 ALX1Q15699 326 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 IRF2BP1Q8IU81 584 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 SUGP1Q8IWZ8 645 aaKnown RBP18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 ZNF654Q8IZM8 581 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 OR8K1Q8NGG5 319 aa18.74■□□□□ 0.59
NPC1L1-203ENST00000423141 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 CSF1RP07333 972 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 FBXW10Q5XX13 1052 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 HDAC7Q8WUI4 952 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 NCAPGQ9BPX3 1015 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 KRT23Q9C075 422 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 ITGA6P23229 1130 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 PKN1Q16512 942 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 CNNM2Q9H8M5 875 aa18.73■□□□□ 0.59
NPC1L1-203ENST00000423141 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 BCAS4Q8TDM0 211 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 CABLES1Q8TDN4 633 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 DNAJC7Q99615 494 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 LUC7L2Q9Y383 392 aaKnown RBP18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 GRIN2DO15399 1336 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 CHD4Q14839 1912 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 SPAG1Q07617 926 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 PPARAQ07869 468 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 PTGDRQ13258 359 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 PDXDC2PQ6P474 469 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 KIAA1328Q86T90 577 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 VGLL2Q8N8G2 317 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 GPATCH11Q8N954 259 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 ANKRD20A12PQ8NF67 263 aa18.72■□□□□ 0.59
NPC1L1-203ENST00000423141 EBAG9O00559 213 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 KRT2P35908 639 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 PRCPP42785 496 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 PMS1P54277 932 aaKnown RBP18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 MCTP2Q6DN12 878 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 HELBQ8NG08 1087 aaPredicted RBP18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 AENQ8WTP8 325 aaKnown RBP18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 CAPS2Q9BXY5 557 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 SAMM50Q9Y512 469 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 SPATA31A3Q5VYP0 1347 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 MACROD2A1Z1Q3 448 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 SNAP23O00161 211 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 TDO2P48775 406 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 CKAP4Q07065 602 aaKnown RBP18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 SND1Q7KZF4 910 aaKnown RBP eCLIP18.71■□□□□ 0.594e-8■■□□□ 12.2
NPC1L1-203ENST00000423141 EEF2KMTQ96G04 330 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 PHF20Q9BVI0 1012 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
NPC1L1-203ENST00000423141 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 ERICH2A1L162 156 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 GNGT1P63211 74 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 CYP27A1Q02318 531 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 LCORLQ8N3X6 602 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 AGPAT5Q9NUQ2 364 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 IDEP14735 1019 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 KLK7P49862 253 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 IL17AQ16552 155 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 STAG1Q8WVM7 1258 aa18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 ZNF512BQ96KM6 892 aaPredicted RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 MYCBPQ99417 103 aaPredicted RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 DMGDHQ9UI17 866 aaKnown RBP18.7■□□□□ 0.58
NPC1L1-203ENST00000423141 KIF13AQ9H1H9 1805 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 MYH6P13533 1939 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 PLEKHA8P1O95397 391 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 TTC38Q5R3I4 469 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 V9GY48 417 aaPredicted RBP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 EIF3HO15372 352 aaKnown RBP eCLIP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 GPTP24298 496 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 HNRNPH1P31943 449 aaKnown RBP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 FKBP15Q5T1M5 1219 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 ZNF658Q5TYW1 1059 aaPredicted RBP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 RNF26Q9BY78 433 aaPredicted RBP18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 POLD4Q9HCU8 107 aa18.69■□□□□ 0.58
NPC1L1-203ENST00000423141 FAM184BQ9ULE4 1060 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms