RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 ANKLE1Q8NAG6 615 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-206ENST00000420121 TACC3Q9Y6A5 838 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 DNAH12Q6ZR08 3092 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 PRDM1O75626 825 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 IGHDP01880 384 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 TDO2P48775 406 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
SSBP3-206ENST00000420121 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 DPF3Q92784 378 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
SSBP3-206ENST00000420121 COBLO75128 1261 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 APPP05067 770 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 ADORA2AP29274 412 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 AAMPQ13685 434 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 TRPV1Q8NER1 839 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-206ENST00000420121 MKNK2Q9HBH9 465 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 GOPCQ9HD26 462 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-206ENST00000420121 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSBP3-206ENST00000420121 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
SSBP3-206ENST00000420121 PFASO15067 1338 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 F5H6K3 240 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 VWA5AO00534 786 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 STRNO43815 780 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 NDUFB10O96000 172 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 COL6A1P12109 1028 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 CYP2C19P33261 490 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 KLRC3Q07444 240 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 PPARAQ07869 468 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 MKL1Q969V6 931 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
SSBP3-206ENST00000420121 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
SSBP3-206ENST00000420121 SZT2Q5T011 3432 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 CYBAP13498 195 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 PLS1Q14651 629 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 RIOX2Q8IUF8 465 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 ABRAQ8N0Z2 381 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 NAPBQ9H115 298 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 MROH8Q9H579 483 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 MCM3APO60318 1980 aa13.16□□□□□ -0.3
SSBP3-206ENST00000420121 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSBP3-206ENST00000420121 FAM47AQ5JRC9 791 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 MFSD14CQ5VZR4 134 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 POTEHQ6S545 545 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
SSBP3-206ENST00000420121 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
SSBP3-206ENST00000420121 EVI5O60447 810 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 SLC25A27O95847 323 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 FGRP09769 529 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 STAT3P40763 770 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 NUCB1Q02818 461 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 ALX1Q15699 326 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-206ENST00000420121 LRRC47Q8N1G4 583 aaKnown RBP13.14□□□□□ -0.31
SSBP3-206ENST00000420121 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms