RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 USP17L2Q6R6M4 530 aa17.56■□□□□ 0.4
LRCH3-202ENST00000414675 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
LRCH3-202ENST00000414675 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
LRCH3-202ENST00000414675 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
LRCH3-202ENST00000414675 MAN1B1Q9UKM7 699 aa17.56■□□□□ 0.4
LRCH3-202ENST00000414675 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
LRCH3-202ENST00000414675 STXBP3O00186 592 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 CALML3P27482 149 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 NOVP48745 357 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 IL17AQ16552 155 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 FERMT2Q96AC1 680 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 BMP15O95972 392 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
LRCH3-202ENST00000414675 MCM7P33993 719 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 DNTTIP2Q5QJE6 756 aaKnown RBP17.55■□□□□ 0.4
LRCH3-202ENST00000414675 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 HEATR3Q7Z4Q2 680 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 DHX58Q96C10 678 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
LRCH3-202ENST00000414675 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
LRCH3-202ENST00000414675 RGPD3A6NKT7 1758 aaPredicted RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 RGPD4Q7Z3J3 1758 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 IKBKBO14920 756 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 AKR1B1P15121 316 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 CHRNA5P30532 468 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 TRAPPC10P48553 1259 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 APOBEC3HQ6NTF7 200 aaKnown RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 XPO4Q9C0E2 1151 aaKnown RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 ZNF646O15015 1829 aaPredicted RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 SMTNL1A8MU46 457 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 G3V3G9 751 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 PARP1P09874 1014 aaKnown RBP17.54■□□□□ 0.4
LRCH3-202ENST00000414675 ATP1A3P13637 1013 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 DCAF8Q5TAQ9 597 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 SPZ1Q9BXG8 430 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 IFNKQ9P0W0 207 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
LRCH3-202ENST00000414675 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
LRCH3-202ENST00000414675 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
LRCH3-202ENST00000414675 USP17L5A8MUK1 530 aa17.53■□□□□ 0.4
LRCH3-202ENST00000414675 NFIAQ12857 509 aa17.53■□□□□ 0.4
LRCH3-202ENST00000414675 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
LRCH3-202ENST00000414675 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
LRCH3-202ENST00000414675 HOOK1Q9UJC3 728 aaKnown RBP17.53■□□□□ 0.4
LRCH3-202ENST00000414675 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 SMC2O95347 1197 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 CASP1P29466 404 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 MYL5Q02045 173 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 MORC3Q14149 939 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 HSP90AA2PQ14568 343 aaPredicted RBP17.52■□□□□ 0.4
LRCH3-202ENST00000414675 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 ZFPM1Q8IX07 1006 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 SPATA20Q8TB22 786 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 SMARCE1Q969G3 411 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 OSBPL5Q9H0X9 879 aaPredicted RBP17.52■□□□□ 0.4
LRCH3-202ENST00000414675 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
LRCH3-202ENST00000414675 IGKV6D-41A0A0C4DH26 115 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 H0YIN7 160 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 CRKP46108 304 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
LRCH3-202ENST00000414675 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
LRCH3-202ENST00000414675 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
LRCH3-202ENST00000414675 STYK1Q6J9G0 422 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
LRCH3-202ENST00000414675 UQCRHLA0A096LP55 91 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 UQCRHP07919 91 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 SLFN14P0C7P3 912 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 SHMT1P34896 483 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 AFMP43652 599 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 FANCCQ00597 558 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 LRRC8AQ8IWT6 810 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 PAGE5Q96GU1 130 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 VAT1LQ9HCJ6 419 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
LRCH3-202ENST00000414675 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
LRCH3-202ENST00000414675 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
LRCH3-202ENST00000414675 PDHBP11177 359 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 CACNB3P54284 484 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.398e-8■■■■■ 27.8
LRCH3-202ENST00000414675 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 DPF2Q92785 391 aa17.5■□□□□ 0.39
LRCH3-202ENST00000414675 CAMKK2Q96RR4 588 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms