RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PRAMEF22A3QJZ6 481 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 GUCY2FP51841 1108 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 FKBP4Q02790 459 aaKnown RBP eCLIP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 SLC39A6Q13433 755 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ME3Q16798 604 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 MUM1Q2TAK8 710 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 INTS8Q75QN2 995 aaKnown RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 NBPF5PQ86XG9 351 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 SLC35F6Q8N357 371 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ZBTB10Q96DT7 871 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 SPAG5Q96R06 1193 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 QTRT2Q9H974 415 aaKnown RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 KCNK9Q9NPC2 374 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PI4KAP2A4QPH2 592 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 RPS6KA4O75676 772 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ZBTB16Q05516 673 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 MAP7Q14244 749 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 TAF11Q15544 211 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 FAM98CQ17RN3 349 aaKnown RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 KIAA0753Q2KHM9 967 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 CYP26C1Q6V0L0 522 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PLA2G4DQ86XP0 818 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PI4KAP1Q8N8J0 262 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 WASF1Q92558 559 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 STMN2Q93045 179 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 RPGRIP1Q96KN7 1286 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 FAM167BQ9BTA0 163 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 VPS16Q9H269 839 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 JAK2O60674 1132 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 SCRN1Q12765 414 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PAK2Q13177 524 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ATL3Q6DD88 541 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 FCHSD1Q86WN1 690 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ABTB1Q969K4 478 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 TRIM47Q96LD4 638 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 TAOK3Q9H2K8 898 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 ACTR5Q9H9F9 607 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 SNRKQ9NRH2 765 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 FANCLQ9NW38 375 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 RGS17Q9UGC6 210 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-203ENST00000406072 PSME4Q14997 1843 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 LAMA4Q16363 1823 aa6.53□□□□□ -1.36
HDAC9-203ENST00000406072 A0A1W2PRG0 241 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 NUTM2BA6NNL0 878 aaPredicted RBP6.52□□□□□ -1.36
HDAC9-203ENST00000406072 NUTM2EB1AL46 878 aaPredicted RBP6.52□□□□□ -1.36
HDAC9-203ENST00000406072 SGSM2O43147 1006 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 FOXO4P98177 505 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 ITPK1Q13572 414 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 KRT71Q3SY84 523 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.36
HDAC9-203ENST00000406072 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.36
HDAC9-203ENST00000406072 TTC14Q96N46 770 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 NBPF3Q9H094 633 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 CD248Q9HCU0 757 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 FAM184BQ9ULE4 1060 aa6.52□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF609O15014 1411 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 COL11A2P13942 1736 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CREB3O43889 395 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 H2AFXP16104 143 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 PAX7P23759 505 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 SLC30A9Q6PML9 568 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 KIRREL3Q8IZU9 778 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 ZBTB38Q8NAP3 1195 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF512BQ96KM6 892 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 ZHX3Q9H4I2 956 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 KIF9Q9HAQ2 790 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 ENC1O14682 589 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 DDIT3P35638 169 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 TNNC1P63316 161 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 TRAF1Q13077 416 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 PDE1CQ14123 709 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 DPCR1Q3MIW9 517 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 KIF6Q6ZMV9 814 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 COPS6Q7L5N1 327 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 TMEM87AQ8NBN3 555 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 JAKMIP2Q96AA8 810 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 LRRC45Q96CN5 670 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 VCX3BQ9H321 246 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 VCX3AQ9NNX9 186 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CWC25Q9NXE8 425 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 NOP53Q9NZM5 478 aaKnown RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 MYH7P12883 1935 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 MYO1FO00160 1098 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CAND2O75155 1236 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 BRCA1P38398 1863 aaKnown RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CRKLP46109 303 aaKnown RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 SESN3P58005 492 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 HAND2P61296 217 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CRYMQ14894 314 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 OTUD7BQ6GQQ9 843 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 TBC1D1Q86TI0 1168 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC125Q86Z20 511 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 DNAJC10Q8IXB1 793 aa6.52□□□□□ -1.37
HDAC9-203ENST00000406072 PARP9Q8IXQ6 854 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms