RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CLEC17AQ6ZS10 378 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 SCYL3Q8IZE3 742 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 RGS22Q8NE09 1264 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 DCAF4Q8WV16 495 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 WASF1Q92558 559 aa31.87■■■□□ 2.69
CPNE1-203ENST00000397442 NDUFB10O96000 172 aa31.86■■■□□ 2.69
CPNE1-203ENST00000397442 GUCY1B3Q02153 619 aa31.86■■■□□ 2.69
CPNE1-203ENST00000397442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.86■■■□□ 2.692e-6■□□□□ 10.3
CPNE1-203ENST00000397442 AKAP17AQ02040 695 aaKnown RBP31.86■■■□□ 2.69
CPNE1-203ENST00000397442 KIAA1755Q5JYT7 1200 aa31.86■■■□□ 2.69
CPNE1-203ENST00000397442 GPATCH4Q5T3I0 446 aaKnown RBP31.86■■■□□ 2.69
CPNE1-203ENST00000397442 GMCL1Q96IK5 515 aa31.86■■■□□ 2.69
CPNE1-203ENST00000397442 GPCPD1Q9NPB8 672 aa31.86■■■□□ 2.69
CPNE1-203ENST00000397442 UBA5Q9GZZ9 404 aa31.85■■■□□ 2.69
CPNE1-203ENST00000397442 SLC1A4P43007 532 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 PRKG1Q13976 671 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 TTBK2Q6IQ55 1244 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 KCTD1Q719H9 257 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 SHISA4Q96DD7 197 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 RIOX1Q9H6W3 641 aa31.84■■■□□ 2.69
CPNE1-203ENST00000397442 CCDC96Q2M329 555 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 NOL9Q5SY16 702 aaKnown RBP31.83■■■□□ 2.69
CPNE1-203ENST00000397442 FERMT3Q86UX7 667 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 OTOFQ9HC10 1997 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 RAD21O60216 631 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 PFKFB3Q16875 520 aaPredicted RBP31.83■■■□□ 2.69
CPNE1-203ENST00000397442 KRT40Q6A162 431 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 CHAMP1Q96JM3 812 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 RBM27Q9P2N5 1060 aaKnown RBP31.83■■■□□ 2.69
CPNE1-203ENST00000397442 CLEC11AQ9Y240 323 aa31.83■■■□□ 2.69
CPNE1-203ENST00000397442 PTPRAP18433 802 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 PIBF1Q8WXW3 757 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 NUP88Q99567 741 aaPredicted RBP31.82■■■□□ 2.68
CPNE1-203ENST00000397442 SH2D4AQ9H788 454 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 VCPKMTQ9H867 229 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 GOPCQ9HD26 462 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 NMRK2Q9NPI5 230 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 PHIPQ8WWQ0 1821 aa31.82■■■□□ 2.68
CPNE1-203ENST00000397442 SCG2P13521 617 aa31.81■■■□□ 2.68
CPNE1-203ENST00000397442 RESTQ13127 1097 aa31.81■■■□□ 2.68
CPNE1-203ENST00000397442 MAP1SQ66K74 1059 aaPredicted RBP31.81■■■□□ 2.68
CPNE1-203ENST00000397442 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.81■■■□□ 2.68
CPNE1-203ENST00000397442 SPICE1Q8N0Z3 855 aa31.81■■■□□ 2.68
CPNE1-203ENST00000397442 BAG4O95429 457 aaKnown RBP31.8■■■□□ 2.68
CPNE1-203ENST00000397442 PPP1R12BO60237 982 aaPredicted RBP31.8■■■□□ 2.68
CPNE1-203ENST00000397442 PICK1Q9NRD5 415 aa31.8■■■□□ 2.68
CPNE1-203ENST00000397442 BMP3P12645 472 aa31.79■■■□□ 2.68
CPNE1-203ENST00000397442 MAP3K9P80192 1104 aa31.79■■■□□ 2.68
CPNE1-203ENST00000397442 WDR18Q9BV38 432 aa31.79■■■□□ 2.68
CPNE1-203ENST00000397442 KIAA1683Q9H0B3 1180 aa31.79■■■□□ 2.68
CPNE1-203ENST00000397442 NF2P35240 595 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 SLC16A2P36021 539 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 ZYXQ15942 572 aaKnown RBP31.78■■■□□ 2.68
CPNE1-203ENST00000397442 ADGRF4Q8IZF3 695 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 VAT1LQ9HCJ6 419 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 VPS54Q9P1Q0 977 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 SNCAIPQ9Y6H5 919 aa31.78■■■□□ 2.68
CPNE1-203ENST00000397442 TRIM29Q14134 588 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 VGLL4Q14135 290 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 NFKBIBQ15653 356 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 PIGSQ96S52 555 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 JMJD4Q9H9V9 463 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 KCNJ14Q9UNX9 436 aa31.77■■■□□ 2.68
CPNE1-203ENST00000397442 FOXD4L6Q3SYB3 417 aaPredicted RBP31.76■■■□□ 2.68
CPNE1-203ENST00000397442 FOXD4L3Q6VB84 417 aaPredicted RBP31.76■■■□□ 2.68
CPNE1-203ENST00000397442 LDHDQ86WU2 507 aa31.76■■■□□ 2.68
CPNE1-203ENST00000397442 MTMR8Q96EF0 704 aa31.76■■■□□ 2.68
CPNE1-203ENST00000397442 RRP36Q96EU6 259 aaKnown RBP31.76■■■□□ 2.68
CPNE1-203ENST00000397442 GBP4Q96PP9 640 aa31.76■■■□□ 2.68
CPNE1-203ENST00000397442 FEZ1Q99689 392 aa31.76■■■□□ 2.68
CPNE1-203ENST00000397442 ZSCAN16Q9H4T2 348 aaPredicted RBP31.76■■■□□ 2.68
CPNE1-203ENST00000397442 MMP1P03956 469 aa31.76■■■□□ 2.67
CPNE1-203ENST00000397442 KIF23Q02241 960 aaPredicted RBP31.76■■■□□ 2.67
CPNE1-203ENST00000397442 MAP3K11Q16584 847 aa31.76■■■□□ 2.67
CPNE1-203ENST00000397442 MCTP1Q6DN14 999 aa31.76■■■□□ 2.67
CPNE1-203ENST00000397442 ZNF526Q8TF50 670 aaPredicted RBP31.76■■■□□ 2.67
CPNE1-203ENST00000397442 TRAF5O00463 557 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 IREB2P48200 963 aaKnown RBP31.75■■■□□ 2.67
CPNE1-203ENST00000397442 SPP2Q13103 211 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 FAM173BQ6P4H8 233 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 BTNL9Q6UXG8 535 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 MOB2Q70IA6 237 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 GPKOWQ92917 476 aaPredicted RBP eCLIP31.75■■■□□ 2.671e-7■■■■□ 26.1
CPNE1-203ENST00000397442 PHF20Q9BVI0 1012 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 ISY1Q9ULR0 285 aaKnown RBP31.75■■■□□ 2.67
CPNE1-203ENST00000397442 ATP6V1DQ9Y5K8 247 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 ZHX2Q9Y6X8 837 aa31.75■■■□□ 2.67
CPNE1-203ENST00000397442 TCHHQ07283 1943 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 KIF28PB7ZC32 967 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 USP17L10C9JJH3 530 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 TMEM232C9JQI7 657 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 FAM83BQ5T0W9 1011 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 WWC2Q6AWC2 1192 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 HOMER1Q86YM7 354 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 ZNF280CQ8ND82 737 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 AS3MTQ9HBK9 375 aa31.74■■■□□ 2.67
CPNE1-203ENST00000397442 XBP1P17861 261 aa31.73■■■□□ 2.67
CPNE1-203ENST00000397442 FMR1Q06787 632 aaKnown RBP eCLIP31.73■■■□□ 2.677e-7■■■□□ 18.6
CPNE1-203ENST00000397442 MTMR2Q13614 643 aa31.73■■■□□ 2.67
CPNE1-203ENST00000397442 TYW1BQ6NUM6 668 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms