RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 ZNF543Q08ER8 600 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 FOXD4L5Q5VV16 416 aaPredicted RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 FOXD4L4Q8WXT5 416 aaPredicted RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 CLMNQ96JQ2 1002 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 TCHHQ07283 1943 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 MYH15Q9Y2K3 1946 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 CYTH3O43739 400 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 SLC1A4P43007 532 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
PPARG-205ENST00000397010 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 UBA5Q9GZZ9 404 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
PPARG-205ENST00000397010 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 MTMR2Q13614 643 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
PPARG-205ENST00000397010 TRIM22Q8IYM9 498 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 CSADQ9Y600 493 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
PPARG-205ENST00000397010 VPS37CA5D8V6 355 aaPredicted RBP16.24■□□□□ 0.19
PPARG-205ENST00000397010 SLC16A2P36021 539 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 SPP2Q13103 211 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 VCPKMTQ9H867 229 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 ELP3Q9H9T3 547 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 STX6O43752 255 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 GNAQP50148 359 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
PPARG-205ENST00000397010 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
PPARG-205ENST00000397010 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
PPARG-205ENST00000397010 V9GY48 417 aaPredicted RBP16.24■□□□□ 0.19
PPARG-205ENST00000397010 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 OTUD7BQ6GQQ9 843 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 VAT1LQ9HCJ6 419 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 COL11A1P12107 1806 aaPredicted RBP16.23■□□□□ 0.19
PPARG-205ENST00000397010 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
PPARG-205ENST00000397010 DEXIO95424 95 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 BMP3P12645 472 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 AKAP17AQ02040 695 aaKnown RBP16.23■□□□□ 0.19
PPARG-205ENST00000397010 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 GPATCH4Q5T3I0 446 aaKnown RBP16.23■□□□□ 0.19
PPARG-205ENST00000397010 ARMC9Q7Z3E5 817 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 AS3MTQ9HBK9 375 aa16.23■□□□□ 0.19
PPARG-205ENST00000397010 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
PPARG-205ENST00000397010 PKN1Q16512 942 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 KIAA1683Q9H0B3 1180 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 KIF3AQ9Y496 699 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 RLFQ13129 1914 aa16.22■□□□□ 0.19
PPARG-205ENST00000397010 TMEM232C9JQI7 657 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 KIF3CO14782 793 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 PRPF3O43395 683 aaKnown RBP16.21■□□□□ 0.19
PPARG-205ENST00000397010 PDCP20941 246 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 HMGCS2P54868 508 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
PPARG-205ENST00000397010 C8orf76Q96K31 380 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.19
PPARG-205ENST00000397010 H3BQV1 296 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 BRD1O95696 1058 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 BACE1P56817 501 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 NUCB2P80303 420 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 IFFO2Q5TF58 517 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 ADGRF4Q8IZF3 695 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.18
PPARG-205ENST00000397010 SHISA4Q96DD7 197 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 PIGSQ96S52 555 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 GBA2Q9HCG7 927 aaPredicted RBP16.21■□□□□ 0.18
PPARG-205ENST00000397010 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 AFG3L2Q9Y4W6 797 aa16.21■□□□□ 0.18
PPARG-205ENST00000397010 PCNTO95613 3336 aa16.2■□□□□ 0.18
PPARG-205ENST00000397010 VCAM1P19320 739 aa16.2■□□□□ 0.18
PPARG-205ENST00000397010 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
PPARG-205ENST00000397010 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
PPARG-205ENST00000397010 RIOX1Q9H6W3 641 aa16.2■□□□□ 0.18
PPARG-205ENST00000397010 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms