RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 EPSTI1Q96J88 318 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 NAP1L4Q99733 375 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 EHMT1Q9H9B1 1298 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 CWC15Q9P013 229 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 SPATA31A1Q5TZJ5 1347 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 SPDYE3A6NKU9 549 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 SF3B2Q13435 895 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 GRAPQ13588 217 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 TNIP1Q15025 636 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 DIXDC1Q155Q3 683 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 GRAPLQ8TC17 118 aaPredicted RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 OXER1Q8TDS5 423 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 CCDC51Q96ER9 411 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 GLT8D2Q9H1C3 349 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 PCDHA4Q9UN74 947 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 PPP2R2CQ9Y2T4 447 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 VIRMAQ69YN4 1812 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 H7C1D1 291 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 TBCAO75347 108 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 COL5A2P05997 1499 aaPredicted RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 GUCY1A2P33402 732 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 RBM43Q6ZSC3 357 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 DHX40Q8IX18 779 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 DYNLL2Q96FJ2 89 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.36□□□□□ -1.23
BDNF-203ENST00000395978 CACNA1FO60840 1977 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 SERPINB2P05120 415 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 FGFR2P21802 821 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 PPP2R3AQ06190 1150 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 CALCRLQ16602 461 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 INTS5Q6P9B9 1019 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 CTR9Q6PD62 1173 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 NEK8Q86SG6 692 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 FCHSD1Q86WN1 690 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 VSTM4Q8IW00 320 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 OGFOD1Q8N543 542 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 OSBPL5Q9H0X9 879 aaPredicted RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 USP40Q9NVE5 1235 aa7.36□□□□□ -1.23
BDNF-203ENST00000395978 PUF60Q9UHX1 559 aaKnown RBP7.36□□□□□ -1.23
BDNF-203ENST00000395978 RPN1P04843 607 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 OR52Z1P0C646 297 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CYP2D6P10635 497 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CKAP4Q07065 602 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 TUBB2AQ13885 445 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 MORC3Q14149 939 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CNPY4Q8N129 248 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 RGS22Q8NE09 1264 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SNX29Q8TEQ0 813 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 PPP1R13BQ96KQ4 1090 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 TUBB2BQ9BVA1 445 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 KCNF1Q9H3M0 494 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 BIN2Q9UBW5 565 aaPredicted RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 KCNJ18B7U540 433 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 TACC1O75410 805 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 TUBBP07437 444 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SLC1A4P43007 532 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 KCNJ12Q14500 433 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CCDC122Q5T0U0 273 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 PAGE5Q96GU1 130 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SPAG5Q96R06 1193 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 NUP58Q9BVL2 599 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SAMSN1Q9NSI8 373 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 PPP1R1BQ9UD71 204 aaPredicted RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 TRAF5O00463 557 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 LAD1O00515 517 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ORC4O43929 436 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ALDH1B1P30837 517 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CDR1P51861 262 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ARL6IP4Q66PJ3 421 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 STXBP4Q6ZWJ1 553 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 NEK11Q8NG66 645 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ARHGEF1Q92888 912 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 TEKT1Q969V4 418 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 NSUN4Q96CB9 384 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 DESI2Q9BSY9 194 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SEPT11Q9NVA2 429 aaKnown RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 MYO6Q9UM54 1294 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SLIT3O75094 1523 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 STRCP1A6NGW2 1772 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 USP17L3A6NCW0 530 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 USP17L4A6NCW7 530 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ERICH4A6NGS2 130 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 CDC25AP30304 524 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 DNA2P51530 1060 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 FAM193AP78312 1265 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 ERCC6LQ2NKX8 1250 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 USP17L1Q7RTZ2 530 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 NAPGQ99747 312 aaPredicted RBP7.35□□□□□ -1.23
BDNF-203ENST00000395978 HDAC9Q9UKV0 1011 aa7.35□□□□□ -1.23
BDNF-203ENST00000395978 TECP42680 631 aa7.34□□□□□ -1.23
BDNF-203ENST00000395978 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms