RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
CPSF7-202ENST00000394888 TOGARAM2Q6ZUX3 1019 aa17.55■□□□□ 0.4
CPSF7-202ENST00000394888 DAGLBQ8NCG7 672 aa17.55■□□□□ 0.4
CPSF7-202ENST00000394888 ZNF446Q9NWS9 450 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 GAKO14976 1311 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 IRF2BP1Q8IU81 584 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 STAMQ92783 540 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 TOM1O60784 492 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 COBLO75128 1261 aa17.54■□□□□ 0.4
CPSF7-202ENST00000394888 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 KLRC4O43908 158 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 KIFC2Q96AC6 838 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 SH3GLB2Q9NR46 395 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 AFMP43652 599 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 MTF1Q14872 753 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 KMT5BQ4FZB7 885 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 C16orf86Q6ZW13 317 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 TMEM47Q9BQJ4 181 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-202ENST00000394888 CDC25AP30304 524 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 CFAP100Q494V2 611 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
CPSF7-202ENST00000394888 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
CPSF7-202ENST00000394888 PP2D1A8MPX8 630 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 SERPINC1P01008 464 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
CPSF7-202ENST00000394888 SYT10Q6XYQ8 523 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
CPSF7-202ENST00000394888 GSDMAQ96QA5 445 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 PODXL2Q9NZ53 605 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 PCDHA4Q9UN74 947 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 PLIN4Q96Q06 1357 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 LDHBP07195 334 aaKnown RBP17.52■□□□□ 0.4
CPSF7-202ENST00000394888 ADKP55263 362 aaKnown RBP17.52■□□□□ 0.4
CPSF7-202ENST00000394888 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 C10orf71Q711Q0 1435 aa17.52■□□□□ 0.4
CPSF7-202ENST00000394888 TSPY2A6NKD2 308 aa17.52■□□□□ 0.39
CPSF7-202ENST00000394888 OLFM4Q6UX06 510 aa17.52■□□□□ 0.39
CPSF7-202ENST00000394888 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.39
CPSF7-202ENST00000394888 LRRC10BA6NIK2 292 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 SPECC1LQ69YQ0 1117 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 BLIDQ8IZY5 108 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 PROM2Q8N271 834 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 BARHL2Q9NY43 387 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 ATAD5Q96QE3 1844 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 SPATA31A6Q5VVP1 1343 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 PHLPP2Q6ZVD8 1323 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 IGSF3O75054 1194 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 MCM7P33993 719 aa17.51■□□□□ 0.39
CPSF7-202ENST00000394888 PMS1P54277 932 aaKnown RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 CT47A1Q5JQC4 288 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 V9GYY5 206 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-202ENST00000394888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 ZNF592Q92610 1267 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 WDR24Q96S15 920 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 ARID3AQ99856 593 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 CBFA2T2O43439 604 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 MAPKAPK5Q8IW41 473 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 PDCL2Q8N4E4 241 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 PPP2R2CQ9Y2T4 447 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 GABPAQ06546 454 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 ARL6IP4Q66PJ3 421 aaKnown RBP17.5■□□□□ 0.39
CPSF7-202ENST00000394888 RAD9BQ6WBX8 426 aa17.5■□□□□ 0.39
CPSF7-202ENST00000394888 PSME4Q14997 1843 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 IGKV6D-41A0A0C4DH26 115 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 GYPCP04921 128 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ETF1P62495 437 aaKnown RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ABL1P00519 1130 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 RFC4P35249 363 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 BTDP43251 543 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ZRSR1Q15695 479 aaKnown RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
CPSF7-202ENST00000394888 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
CPSF7-202ENST00000394888 ZSCAN20P17040 1043 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms