RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RANBP6O60518 1105 aaKnown RBP36.45■■■■□ 3.43
CMTM4-202ENST00000394106 HAND2P61296 217 aa36.45■■■■□ 3.43
CMTM4-202ENST00000394106 SPATC1LQ9H0A9 340 aa36.45■■■■□ 3.43
CMTM4-202ENST00000394106 MORN1Q5T089 497 aa36.44■■■■□ 3.42
CMTM4-202ENST00000394106 MKL1Q969V6 931 aa36.44■■■■□ 3.42
CMTM4-202ENST00000394106 MOV10L1Q9BXT6 1211 aaKnown RBP36.44■■■■□ 3.42
CMTM4-202ENST00000394106 HMGCRP04035 888 aa36.43■■■■□ 3.42
CMTM4-202ENST00000394106 RGS2P41220 211 aa36.43■■■■□ 3.42
CMTM4-202ENST00000394106 RRP12Q5JTH9 1297 aaKnown RBP36.43■■■■□ 3.42
CMTM4-202ENST00000394106 IVNS1ABPQ9Y6Y0 642 aa36.43■■■■□ 3.42
CMTM4-202ENST00000394106 ORC4O43929 436 aa36.42■■■■□ 3.42
CMTM4-202ENST00000394106 USP6NLQ92738 828 aa36.42■■■■□ 3.42
CMTM4-202ENST00000394106 PPP1R9AQ9ULJ8 1098 aa36.42■■■■□ 3.42
CMTM4-202ENST00000394106 COL11A1P12107 1806 aaPredicted RBP36.41■■■■□ 3.42
CMTM4-202ENST00000394106 TRIB2Q92519 343 aa36.41■■■■□ 3.42
CMTM4-202ENST00000394106 TNRC18O15417 2968 aaPredicted RBP36.4■■■■□ 3.42
CMTM4-202ENST00000394106 NMT2O60551 498 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 GJB1P08034 283 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 XRCC5P13010 732 aaKnown RBP36.4■■■■□ 3.42
CMTM4-202ENST00000394106 PTPREP23469 700 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 TRIM32Q13049 653 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 SYNPO2Q9UMS6 1093 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 STX8Q9UNK0 236 aa36.4■■■■□ 3.42
CMTM4-202ENST00000394106 SLC15A5A6NIM6 579 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 FGRP09769 529 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 ERCC3P19447 782 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 MAP2K5Q13163 448 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 TMEM132BQ14DG7 1078 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 PPP4R3BQ5MIZ7 849 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 GMCL1P1Q8NEA9 526 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 NKX2-3Q8TAU0 364 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 APBA2Q99767 749 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 SLF1Q9BQI6 1058 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 IL17RBQ9NRM6 502 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 ADAMTS5Q9UNA0 930 aa36.39■■■■□ 3.42
CMTM4-202ENST00000394106 VWA5AO00534 786 aa36.38■■■■□ 3.41
CMTM4-202ENST00000394106 ZKSCAN1P17029 563 aaPredicted RBP36.38■■■■□ 3.41
CMTM4-202ENST00000394106 SLFN13Q68D06 897 aa36.38■■■■□ 3.41
CMTM4-202ENST00000394106 NCAPG2Q86XI2 1143 aa36.38■■■■□ 3.41
CMTM4-202ENST00000394106 SHCBP1Q8NEM2 672 aa36.38■■■■□ 3.41
CMTM4-202ENST00000394106 NBPF3Q9H094 633 aa36.38■■■■□ 3.41
CMTM4-202ENST00000394106 GJA8P48165 433 aa36.37■■■■□ 3.41
CMTM4-202ENST00000394106 CCL14Q16627 93 aa36.37■■■■□ 3.41
CMTM4-202ENST00000394106 TBC1D10CQ8IV04 446 aa36.37■■■■□ 3.41
CMTM4-202ENST00000394106 CHMP4CQ96CF2 233 aa36.37■■■■□ 3.41
CMTM4-202ENST00000394106 SHISA4Q96DD7 197 aa36.37■■■■□ 3.41
CMTM4-202ENST00000394106 ISY1Q9ULR0 285 aaKnown RBP36.37■■■■□ 3.41
CMTM4-202ENST00000394106 BRCA2P51587 3418 aa36.36■■■■□ 3.41
CMTM4-202ENST00000394106 GRB14Q14449 540 aa36.36■■■■□ 3.41
CMTM4-202ENST00000394106 AKNAD1Q5T1N1 836 aa36.36■■■■□ 3.41
CMTM4-202ENST00000394106 MFSD6Q6ZSS7 791 aa36.36■■■■□ 3.41
CMTM4-202ENST00000394106 TRMT44Q8IYL2 757 aaKnown RBP36.36■■■■□ 3.41
CMTM4-202ENST00000394106 U2AF1L4Q8WU68 220 aaKnown RBP36.36■■■■□ 3.41
CMTM4-202ENST00000394106 ZNF213O14771 459 aa36.35■■■■□ 3.41
CMTM4-202ENST00000394106 DEFB118Q96PH6 123 aa36.35■■■■□ 3.41
CMTM4-202ENST00000394106 IL25Q9H293 177 aa36.35■■■■□ 3.41
CMTM4-202ENST00000394106 MROH8Q9H579 483 aa36.35■■■■□ 3.41
CMTM4-202ENST00000394106 LAMA4Q16363 1823 aa36.34■■■■□ 3.41
CMTM4-202ENST00000394106 STAG1Q8WVM7 1258 aa36.34■■■■□ 3.41
CMTM4-202ENST00000394106 DSCC1Q9BVC3 393 aa36.34■■■■□ 3.41
CMTM4-202ENST00000394106 XRN2Q9H0D6 950 aaKnown RBP eCLIP36.34■■■■□ 3.41
CMTM4-202ENST00000394106 PRPF38AQ8NAV1 312 aaKnown RBP36.33■■■■□ 3.41
CMTM4-202ENST00000394106 KIFC2Q96AC6 838 aa36.33■■■■□ 3.41
CMTM4-202ENST00000394106 RNF41Q9H4P4 317 aaPredicted RBP36.33■■■■□ 3.41
CMTM4-202ENST00000394106 PAK6Q9NQU5 681 aaPredicted RBP36.33■■■■□ 3.41
CMTM4-202ENST00000394106 SGPL1O95470 568 aa36.32■■■■□ 3.4
CMTM4-202ENST00000394106 BMP3P12645 472 aa36.32■■■■□ 3.4
CMTM4-202ENST00000394106 PRKAR2AP13861 404 aaKnown RBP36.32■■■■□ 3.4
CMTM4-202ENST00000394106 HMX1Q9NP08 348 aaPredicted RBP36.32■■■■□ 3.4
CMTM4-202ENST00000394106 FEM1BQ9UK73 627 aa36.32■■■■□ 3.4
CMTM4-202ENST00000394106 RPTORQ8N122 1335 aa36.32■■■■□ 3.4
CMTM4-202ENST00000394106 STRNO43815 780 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 SLC25A27O95847 323 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 PCP11498 1178 aaKnown RBP36.31■■■■□ 3.4
CMTM4-202ENST00000394106 CHMLP26374 656 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 ADORA2AP29274 412 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 STAT3P40763 770 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 CENPQQ7L2Z9 268 aaPredicted RBP36.31■■■■□ 3.4
CMTM4-202ENST00000394106 DPP9Q86TI2 863 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 REPS2Q8NFH8 660 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 MTMR7Q9Y216 660 aa36.31■■■■□ 3.4
CMTM4-202ENST00000394106 CTDP1Q9Y5B0 961 aaPredicted RBP36.31■■■■□ 3.4
CMTM4-202ENST00000394106 MCCP23508 829 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 SLC1A4P43007 532 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 RIOX2Q8IUF8 465 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 NPLOC4Q8TAT6 608 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 RUFY2Q8WXA3 655 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 ZNF214Q9UL59 606 aaPredicted RBP36.3■■■■□ 3.4
CMTM4-202ENST00000394106 NEDD4P46934 1319 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 RAD50Q92878 1312 aa36.3■■■■□ 3.4
CMTM4-202ENST00000394106 ZNF236Q9UL36 1845 aa36.29■■■■□ 3.4
CMTM4-202ENST00000394106 TFRCP02786 760 aaKnown RBP36.29■■■■□ 3.4
CMTM4-202ENST00000394106 GMCL1Q96IK5 515 aa36.29■■■■□ 3.4
CMTM4-202ENST00000394106 FLRT1Q9NZU1 646 aa36.29■■■■□ 3.4
CMTM4-202ENST00000394106 CTNNA3Q9UI47 895 aa36.29■■■■□ 3.4
CMTM4-202ENST00000394106 TMEM232C9JQI7 657 aa36.28■■■■□ 3.4
CMTM4-202ENST00000394106 ZBED4O75132 1171 aa36.28■■■■□ 3.4
CMTM4-202ENST00000394106 HOXC6P09630 235 aa36.28■■■■□ 3.4
CMTM4-202ENST00000394106 CACNB2Q08289 660 aaPredicted RBP36.28■■■■□ 3.4
CMTM4-202ENST00000394106 IMMTQ16891 758 aaKnown RBP36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms