RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 GMCL1Q96IK5 515 aa28.2■■■□□ 2.1
LRFN4-202ENST00000393952 CPVLQ9H3G5 476 aa28.2■■■□□ 2.1
LRFN4-202ENST00000393952 VCPKMTQ9H867 229 aa28.2■■■□□ 2.1
LRFN4-202ENST00000393952 AS3MTQ9HBK9 375 aa28.2■■■□□ 2.1
LRFN4-202ENST00000393952 CIZ1Q9ULV3 898 aaPredicted RBP28.2■■■□□ 2.1
LRFN4-202ENST00000393952 ZHX2Q9Y6X8 837 aa28.2■■■□□ 2.1
LRFN4-202ENST00000393952 STK36Q9NRP7 1315 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 UBE2Q2LH0YL09 131 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 SLC1A4P43007 532 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 KCTD1Q719H9 257 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 TRIM22Q8IYM9 498 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 ANKRD13AQ8IZ07 590 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 CLMNQ96JQ2 1002 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 NUP88Q99567 741 aaPredicted RBP28.19■■■□□ 2.1
LRFN4-202ENST00000393952 CHMP5Q9NZZ3 219 aa28.19■■■□□ 2.1
LRFN4-202ENST00000393952 ISY1Q9ULR0 285 aaKnown RBP28.19■■■□□ 2.1
LRFN4-202ENST00000393952 ITGBL1O95965 494 aaPredicted RBP28.18■■■□□ 2.1
LRFN4-202ENST00000393952 SPP2Q13103 211 aa28.18■■■□□ 2.1
LRFN4-202ENST00000393952 PKP1Q13835 747 aa28.18■■■□□ 2.1
LRFN4-202ENST00000393952 LZTS2Q9BRK4 669 aa28.18■■■□□ 2.1
LRFN4-202ENST00000393952 KIAA1683Q9H0B3 1180 aa28.18■■■□□ 2.1
LRFN4-202ENST00000393952 SYT1P21579 422 aa28.17■■■□□ 2.1
LRFN4-202ENST00000393952 GPATCH4Q5T3I0 446 aaKnown RBP28.17■■■□□ 2.1
LRFN4-202ENST00000393952 TTBK2Q6IQ55 1244 aa28.17■■■□□ 2.1
LRFN4-202ENST00000393952 ZNF280CQ8ND82 737 aa28.17■■■□□ 2.1
LRFN4-202ENST00000393952 RNF26Q9BY78 433 aaPredicted RBP28.17■■■□□ 2.1
LRFN4-202ENST00000393952 UBA5Q9GZZ9 404 aa28.17■■■□□ 2.1
LRFN4-202ENST00000393952 ELP3Q9H9T3 547 aa28.17■■■□□ 2.1
LRFN4-202ENST00000393952 hCG_1642624A0A1W2PR95 340 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 USP17L10C9JJH3 530 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 KIF3CO14782 793 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 CYTH3O43739 400 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 CELF2O95319 508 aaKnown RBP28.16■■■□□ 2.1
LRFN4-202ENST00000393952 FOSBP53539 338 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 MTMR2Q13614 643 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 LARP1BQ659C4 914 aaKnown RBP28.16■■■□□ 2.1
LRFN4-202ENST00000393952 KIF3AQ9Y496 699 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 V9GY48 417 aaPredicted RBP28.16■■■□□ 2.1
LRFN4-202ENST00000393952 TRIM75PA6NK02 468 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 PRPF3O43395 683 aaKnown RBP28.16■■■□□ 2.1
LRFN4-202ENST00000393952 BMP3P12645 472 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 LDLRAD1Q5T700 205 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 CNKSR2Q8WXI2 1034 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 PIBF1Q8WXW3 757 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 AIFM3Q96NN9 605 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 SPZ1Q9BXG8 430 aa28.16■■■□□ 2.1
LRFN4-202ENST00000393952 TRPM7Q96QT4 1865 aa28.15■■■□□ 2.1
LRFN4-202ENST00000393952 AKAP17AQ02040 695 aaKnown RBP28.15■■■□□ 2.1
LRFN4-202ENST00000393952 DGKZQ13574 1117 aa28.15■■■□□ 2.1
LRFN4-202ENST00000393952 GBA2Q9HCG7 927 aaPredicted RBP28.15■■■□□ 2.1
LRFN4-202ENST00000393952 AFG3L2Q9Y4W6 797 aa28.15■■■□□ 2.1
LRFN4-202ENST00000393952 DEXIO95424 95 aa28.14■■■□□ 2.1
LRFN4-202ENST00000393952 PDCP20941 246 aa28.14■■■□□ 2.1
LRFN4-202ENST00000393952 SLC16A2P36021 539 aa28.14■■■□□ 2.1
LRFN4-202ENST00000393952 BACE1P56817 501 aa28.14■■■□□ 2.1
LRFN4-202ENST00000393952 FAM83BQ5T0W9 1011 aa28.14■■■□□ 2.1
LRFN4-202ENST00000393952 STX6O43752 255 aa28.13■■■□□ 2.09
LRFN4-202ENST00000393952 SMARCA1P28370 1054 aa28.13■■■□□ 2.09
LRFN4-202ENST00000393952 PKN1Q16512 942 aa28.13■■■□□ 2.09
LRFN4-202ENST00000393952 ALG1Q9BT22 464 aa28.13■■■□□ 2.09
LRFN4-202ENST00000393952 EMILIN3Q9NT22 766 aa28.13■■■□□ 2.09
LRFN4-202ENST00000393952 USP14P54578 494 aa28.12■■■□□ 2.09
LRFN4-202ENST00000393952 FKBP1BP68106 108 aa28.12■■■□□ 2.09
LRFN4-202ENST00000393952 RIOX1Q9H6W3 641 aa28.12■■■□□ 2.09
LRFN4-202ENST00000393952 VAT1LQ9HCJ6 419 aa28.12■■■□□ 2.09
LRFN4-202ENST00000393952 SPDYE5A6NIY4 337 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 TMEM232C9JQI7 657 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 NUCB2P80303 420 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 ERO1BQ86YB8 467 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 WASF1Q92558 559 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 LPAR1Q92633 364 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 OTUD5Q96G74 571 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 ZDHHC9Q9Y397 364 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 VPS37CA5D8V6 355 aaPredicted RBP28.11■■■□□ 2.09
LRFN4-202ENST00000393952 CST9Q5W186 159 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 C2orf69Q8N8R5 385 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 GJB4Q9NTQ9 266 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 MTMR6Q9Y217 621 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 PTPRFP10586 1907 aa28.11■■■□□ 2.09
LRFN4-202ENST00000393952 HMGCS2P54868 508 aa28.1■■■□□ 2.09
LRFN4-202ENST00000393952 PPATQ06203 517 aa28.1■■■□□ 2.09
LRFN4-202ENST00000393952 FOXD4L5Q5VV16 416 aaPredicted RBP28.1■■■□□ 2.09
LRFN4-202ENST00000393952 OTUD7BQ6GQQ9 843 aa28.1■■■□□ 2.09
LRFN4-202ENST00000393952 ADGRF4Q8IZF3 695 aa28.1■■■□□ 2.09
LRFN4-202ENST00000393952 FOXD4L4Q8WXT5 416 aaPredicted RBP28.1■■■□□ 2.09
LRFN4-202ENST00000393952 C8orf76Q96K31 380 aa28.1■■■□□ 2.09
LRFN4-202ENST00000393952 RBM27Q9P2N5 1060 aaKnown RBP28.1■■■□□ 2.09
LRFN4-202ENST00000393952 C19orf81C9J6K1 198 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 WDR46O15213 610 aaKnown RBP28.09■■■□□ 2.09
LRFN4-202ENST00000393952 BRD1O95696 1058 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 GUCY1B3Q02153 619 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 IKQ13123 557 aaPredicted RBP28.09■■■□□ 2.09
LRFN4-202ENST00000393952 HOMER1Q86YM7 354 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 PIGSQ96S52 555 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 JMJD4Q9H9V9 463 aa28.09■■■□□ 2.09
LRFN4-202ENST00000393952 UNCXA6NJT0 531 aa28.08■■■□□ 2.09
LRFN4-202ENST00000393952 H3BQV1 296 aa28.08■■■□□ 2.09
LRFN4-202ENST00000393952 SCG2P13521 617 aa28.08■■■□□ 2.09
LRFN4-202ENST00000393952 PFKFB3Q16875 520 aaPredicted RBP28.08■■■□□ 2.09
LRFN4-202ENST00000393952 IFFO2Q5TF58 517 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms