RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 CXCL9Q07325 125 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 CFAP100Q494V2 611 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 TMTC2Q8N394 836 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 ZNF592Q92610 1267 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 OSBPL5Q9H0X9 879 aaPredicted RBP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 CNPY2Q9Y2B0 182 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 V9GYY5 206 aaPredicted RBP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 AP5Z1O43299 807 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 PNMA6AP0CW24 399 aaPredicted RBP21.66■■□□□ 1.06
CCDC50-202ENST00000392456 MAP2K2P36507 400 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 HDLBPQ00341 1268 aaKnown RBP21.66■■□□□ 1.06
CCDC50-202ENST00000392456 RASSF7Q02833 373 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 GPS2Q13227 327 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 NIM1KQ8IY84 436 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 CEP89Q96ST8 783 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 FAM198AQ9UFP1 575 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 SYNE3Q6ZMZ3 975 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 FANCBQ8NB91 859 aa21.66■■□□□ 1.06
CCDC50-202ENST00000392456 TROAPQ12815 778 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 ZNF444Q8N0Y2 327 aaPredicted RBP21.65■■□□□ 1.06
CCDC50-202ENST00000392456 H3BQV1 296 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 GABPAQ06546 454 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 C11orf91Q3C1V1 193 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 IFFO2Q5TF58 517 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 ANKRD20A12PQ8NF67 263 aa21.65■■□□□ 1.06
CCDC50-202ENST00000392456 FOCADQ5VW36 1801 aa21.64■■□□□ 1.06
CCDC50-202ENST00000392456 FER1L6Q2WGJ9 1857 aa21.64■■□□□ 1.06
CCDC50-202ENST00000392456 SHTN1A0MZ66 631 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 RTN1Q16799 776 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 TSPY3P0CV98 308 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 TSPY8P0CW00 308 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 GUCY1A2P33402 732 aa21.64■■□□□ 1.05
CCDC50-202ENST00000392456 DDTLA6NHG4 134 aaPredicted RBP21.63■■□□□ 1.05
CCDC50-202ENST00000392456 TTC36A6NLP5 189 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 SPC24Q8NBT2 197 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 CALR3Q96L12 384 aaKnown RBP21.63■■□□□ 1.05
CCDC50-202ENST00000392456 VPS33BQ9H267 617 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 CCDC196A0A1B0GTZ2 297 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 FAM196BA6NMK8 535 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 POLR3GO15318 223 aaPredicted RBP21.63■■□□□ 1.05
CCDC50-202ENST00000392456 BORCS6Q96GS4 357 aa21.63■■□□□ 1.05
CCDC50-202ENST00000392456 PTGS1P23219 599 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 RESTQ13127 1097 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 PPP2R5AQ15172 486 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 RPAINQ86UA6 219 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 USP48Q86UV5 1035 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 JMYQ8N9B5 988 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 SLC26A6Q9BXS9 759 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 BAZ2BQ9UIF8 2168 aaKnown RBP21.62■■□□□ 1.05
CCDC50-202ENST00000392456 KIF3CO14782 793 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 GADD45BO75293 160 aaPredicted RBP21.62■■□□□ 1.05
CCDC50-202ENST00000392456 MAP9Q49MG5 647 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 CEP135Q66GS9 1140 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 CATIPQ7Z7H3 387 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
CCDC50-202ENST00000392456 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 NID2Q14112 1375 aa21.62■■□□□ 1.05
CCDC50-202ENST00000392456 PLEKHA8P1O95397 391 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 BIRC2Q13490 618 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 IDI2Q9BXS1 227 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 PSME4Q14997 1843 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 CLRN2A0PK11 232 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 IFNAR1P17181 557 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 ZKSCAN8Q15776 578 aaPredicted RBP21.61■■□□□ 1.05
CCDC50-202ENST00000392456 TPRNQ4KMQ1 711 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 MMS22LQ6ZRQ5 1243 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 RASGRP2Q7LDG7 609 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 JDP2Q8WYK2 163 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 UBXN6Q9BZV1 441 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 DNAJC18Q9H819 358 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 TFIP11Q9UBB9 837 aaKnown RBP21.61■■□□□ 1.05
CCDC50-202ENST00000392456 SERPINB13Q9UIV8 391 aa21.61■■□□□ 1.05
CCDC50-202ENST00000392456 FIBPO43427 364 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 SSR1P43307 286 aaKnown RBP21.6■■□□□ 1.05
CCDC50-202ENST00000392456 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
CCDC50-202ENST00000392456 C8orf76Q96K31 380 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 STX8Q9UNK0 236 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 KLHL33A6NCF5 533 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 SPDYE2BA6NHP3 402 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 SPDYE6P0CI01 402 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 SHROOM1Q2M3G4 852 aaPredicted RBP21.6■■□□□ 1.05
CCDC50-202ENST00000392456 CLEC10AQ8IUN9 316 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 PPM1EQ8WY54 764 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 ALG1Q9BT22 464 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
CCDC50-202ENST00000392456 MTMR7Q9Y216 660 aa21.6■■□□□ 1.05
CCDC50-202ENST00000392456 ECM29Q5VYK3 1845 aa21.59■■□□□ 1.05
CCDC50-202ENST00000392456 AKR1B1P15121 316 aa21.59■■□□□ 1.05
CCDC50-202ENST00000392456 SHMT1P34896 483 aa21.59■■□□□ 1.05
CCDC50-202ENST00000392456 FUT2Q10981 343 aa21.59■■□□□ 1.05
CCDC50-202ENST00000392456 DGKHQ86XP1 1220 aa21.59■■□□□ 1.05
CCDC50-202ENST00000392456 CDKL5O76039 1030 aa21.58■■□□□ 1.05
CCDC50-202ENST00000392456 CALRP27797 417 aaKnown RBP21.58■■□□□ 1.05
CCDC50-202ENST00000392456 CLCN6P51797 869 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms